relax SVN archive

Merged r11234 from the 1.3.5 tag into the 1.3 line.

The command used was:
svn merge -r11233:11234 svn+ssh://bugman@.../svn/relax/tags/1.3.5 .

-----
r11234 | bugman | 2010-06-12 17:23:16 +0200 (Sat, 12 Jun 2010) | 3 lines
Changed paths:
M /tags/1.3.5/scons/manuals.py

Excluded minfx from the API manual compilation.
-----

Updated the API documentation for relax 1.3.5.

Excluded minfx from the API manual compilation.

The PyMOL module pymol.cmd is now available within the pymol user function class.

This is accessible as pymol.cmd from the prompt/script interface.

Reverted r11231 as this is not the best way to control pymol.

The command used was:
svn merge -r11231:11230 .

Added a method for translating pymol.cmd.do() commands into specific pymol.cmd functions.

This prevents problems with commands being executed asynchronously. For example images were being
saved before ray-tracing was complete.

Bug fix for the control of PyMOL (as a module).

Updated the HTML version of the relax manual to 1.3.5.

Addition of the 1.3.5 relax manual to the repository for downstream packagers.

Updated the version number to 1.3.5.