Commit | Date | |
---|---|---|
[r11163]
by
bugman
Huge bug fix for the 'population' N-state model. The probabilities of each state was being set to that of the last state. This is fatal for this |
2010-04-28 14:35:26 | Tree |
[r11162]
by
bugman
The weights of each state are now set to equal probability prior to the 'population' opt. This is in the 'population' N-state model system test script. |
2010-04-28 09:26:03 | Tree |
2010-04-27 18:11:41 | Tree | |
[r11160]
by
bugman
Removed the calls to rdc.display() and pcs.display(). These were rightfully failing for the empty data lists, so should not be tested. |
2010-04-27 16:57:55 | Tree |
[r11159]
by
bugman
Modified the RDC and PCS read() function to not add align_id to the cdp structures if no data is present. |
2010-04-27 16:51:21 | Tree |
[r11158]
by
bugman
Created a system test for the 'population' N-state model with missing data. This should thoroughly test out this model! First the 'fixed' model is optimised, and then the |
2010-04-27 16:39:26 | Tree |
[r11157]
by
bugman
Implemented dfunc_tensor_opt() and d2func_tensor_opt() allowing all optimisation algorithms to be used. The 'fixed' N-state model can now be optimised using Newton optimisation. On my machine, the |
2010-04-27 16:15:55 | Tree |
[r11156]
by
bugman
Forked the test_lactose_n_state() system test for both the 'population' and 'fixed' models. The 2 new system tests are test_lactose_n_state_fixed() and test_lactose_n_state_population(). |
2010-04-27 16:03:40 | Tree |
2010-04-27 15:59:14 | Tree | |
[r11154]
by
bugman
The n_state_model.select_model() user function can now change the model. Previously a RelaxError was thrown, but now a warning is given that the model is changing. This |
2010-04-27 15:58:00 | Tree |