relax SVN archive

The old and unused functions start_noe() and start_rx() were deleted.

Cleaned up relax_fit.py code, which was broken after revision http://svn.gna.org/viewcvs/relax?rev=10960&view=rev.

Local tm flag was temporarly set as True to enable to select each tensor to be calculated without first calculating local tm model.

I propose we add a menu entry (in Settings) that users can enable all the tensor calculations.

Redirection of system output to relaxGUI controller is temporarly disabled for automatic model-free calculation.

This is done to find the error causing relaxGUI to crash in final analysis, as discussed here: https://gna.org/task/?6847#comment40.

Added a series of new cone types to generic_fns.structure.cones.

Renamed the initialised PyMOL executable object from 'pymol' to 'pymol_ob'.

This is to avoid the name clash with the pymol python package.

Renamed the prompt and generic_fns pymol modules to pymol_control to avoid the clash with real PyMOL.

Started to redesign the generic_fns.pymol module to use the pymol python package.

This involves much renaming of the PyMOL pipe object which is not the PyMOL executable object. This
attempts to use the pymol python package, and if not available PyMOL will be run from the command
line as a pipe.

Added the import of pymol modules to the dependency checks.

Removed the pipe check from the pymol.command() user function.

This is not necessary.