relax SVN archive

The proper function from the order_parameters module is being called to calc the cone angle.

This allows the code to operate, but the function is not yet implemented.

Shifted the "Contact relaxGUI" and "References" menu entries into the "Help" menu.

The "Extras" menu has been deleted. These menu entries are better suited for the help menu,
especially the "Contact relaxGUI".

Modified how the relax references are handled.

Instead of opening http://www.nmr-relax.com/refs.html in a browser, a HTML window is now being used
to display all relevant references. The refs are coming from the info container.

This is far from complete. To be added are:
- Links "(more)" added to the end of each reference. This will open a new HTML page with the
full information, DOI link, abstract, etc. for each reference separately.
- Make the DOI link open in a brower.
- Make the forward and reverse buttons functional.

The HTML also needs to be prettified.

Merged revisions 10694,10699 via svnmerge from
svn+ssh://bugman@.../svn/relax/1.3

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r10694 | bugman | 2010-02-12 10:50:17 +0100 (Fri, 12 Feb 2010) | 5 lines

Fix for the iso cone frame order order parameter.

The c11^2, c12^2, c21^2 and c22^2 element equations were incorrect.
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r10699 | bugman | 2010-02-16 11:01:35 +0100 (Tue, 16 Feb 2010) | 5 lines

Fix for the Lipari and Szabo reference information.

The classes were not being instantiated.
........

Fix for the Lipari and Szabo reference information.

The classes were not being instantiated.

Stored settings are now synchronized with settings dialog for relax settings and peak file settings.

This settings_read_patch patch was attached to https://gna.org/task/?6847 by Michael
Bieri (https://gna.org/users/michaelbieri), in the zip file patches.zip
(https://gna.org/support/download.php?file_id=8122).

The patch did not apply cleanly, so the last part of the patch was manually applied.

Option to load a sequence file was added back to the settings.

This settings_patch patch was attached to https://gna.org/task/?6847 by Michael
Bieri (https://gna.org/users/michaelbieri), in the zip file patches.zip
(https://gna.org/support/download.php?file_id=8122).

Unresolved Residues and PDB file will be read of data storage and transfered to relax_fit.py.

This execute_rx_patch patch was attached to https://gna.org/task/?6847 by Michael Bieri
(https://gna.org/users/michaelbieri), in the zip file patches.zip
(https://gna.org/support/download.php?file_id=8122).

Relaxation times are correctly read from data storage.

This relax_times_patch patch was attached to https://gna.org/task/?6847 by Michael
Bieri (https://gna.org/users/michaelbieri), in the zip file patches.zip
(https://gna.org/support/download.php?file_id=8122).

Fix for the iso cone frame order order parameter.

The c11^2, c12^2, c21^2 and c22^2 element equations were incorrect.