relax SVN archive

Merged revisions 10611-10612,10626-10631 via svnmerge from
svn+ssh://bugman@.../svn/relax/1.3

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r10611 | bugman | 2010-02-01 23:36:57 +0100 (Mon, 01 Feb 2010) | 5 lines

Bug fix for the running of the test suite.

The interpreter _on() and _off() methods are now called on() and off()!
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r10612 | bugman | 2010-02-02 00:19:55 +0100 (Tue, 02 Feb 2010) | 3 lines

Switched from using a cone angle to using an order parameter in the isotropic cone frame order model.
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r10626 | bugman | 2010-02-03 11:22:00 +0100 (Wed, 03 Feb 2010) | 5 lines

Added the stub function maths_fns.order_parameters.iso_cone_S_to_cos_theta().

This will be used to convert the order parameter S into the cosine of the cone angle.
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r10627 | bugman | 2010-02-03 18:00:17 +0100 (Wed, 03 Feb 2010) | 16 lines

Redesigned get_intro_string() to return a container of different strings.

The method is now called get_intro_text() and returns a container with the following str objects:
- title: The program title 'relax'
- version: For example 'repository checkout' or '1.3.8'.
- desc: The short program description.
- copyright: A list of copyright statements.
- licence: Text pertaining to the licencing.
- errors: A list of import errors.

This is being abstracted so that the different UIs can use this differently. The prompt/script can
word wrap to 100 char (80 char in Windows), and print this to stdout. The GUI can use this in the
about prompt and not print to stdout. Other interfaces can use this in any other way. And the
information content can be expanded for different purposes.
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r10628 | bugman | 2010-02-03 18:09:01 +0100 (Wed, 03 Feb 2010) | 6 lines

Shifted the introductory text object into its own module.

This makes the use of this object more flexible as anything and any part of the program can import
it.
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r10629 | bugman | 2010-02-03 18:15:59 +0100 (Wed, 03 Feb 2010) | 5 lines

Shifted the spacing() method from relax to the intro module and renamed it to centre().

The docstring has also been expanded to include epydoc tags.
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r10630 | bugman | 2010-02-03 18:26:28 +0100 (Wed, 03 Feb 2010) | 6 lines

The introductory text for the prompt/script based interface is now recreated.

The _build_intro_text() method has been added to replicate the formatting of the deleted
get_intro_text() method of the main relax class. This formatting is only to be used in these 2 UIs.
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r10631 | bugman | 2010-02-03 18:28:49 +0100 (Wed, 03 Feb 2010) | 7 lines

Changed the program description again.

The program is now described as "Molecular dynamics by NMR data analysis". This takes into account
that this is for proteins, RNA, DNA, organic molecules, sugars, etc., and for relaxation data, RDCs,
PCSs, NOEs, and all NMR data.
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Changed the program description again.

The program is now described as "Molecular dynamics by NMR data analysis". This takes into account
that this is for proteins, RNA, DNA, organic molecules, sugars, etc., and for relaxation data, RDCs,
PCSs, NOEs, and all NMR data.

The introductory text for the prompt/script based interface is now recreated.

The _build_intro_text() method has been added to replicate the formatting of the deleted
get_intro_text() method of the main relax class. This formatting is only to be used in these 2 UIs.

Shifted the spacing() method from relax to the intro module and renamed it to centre().

The docstring has also been expanded to include epydoc tags.

Shifted the introductory text object into its own module.

This makes the use of this object more flexible as anything and any part of the program can import
it.

Redesigned get_intro_string() to return a container of different strings.

The method is now called get_intro_text() and returns a container with the following str objects:
- title: The program title 'relax'
- version: For example 'repository checkout' or '1.3.8'.
- desc: The short program description.
- copyright: A list of copyright statements.
- licence: Text pertaining to the licencing.
- errors: A list of import errors.

This is being abstracted so that the different UIs can use this differently. The prompt/script can
word wrap to 100 char (80 char in Windows), and print this to stdout. The GUI can use this in the
about prompt and not print to stdout. Other interfaces can use this in any other way. And the
information content can be expanded for different purposes.

Added the stub function maths_fns.order_parameters.iso_cone_S_to_cos_theta().

This will be used to convert the order parameter S into the cosine of the cone angle.

Added some menu separators to prettify the menus.

Completely redesigned the relax about dialog into its own widget using wx.PaintDC.

This works much better! Ideas from http://zetcode.com/wxpython/customwidgets/ were used.

Shifted the saved file name out of the relax data store.

This is a temporary variable and does not need to be stored or saved!