Not much code has been unaffected by this change. The changes include:
- Important fixes for the whitespace rule violations. There were identified by the
'scripts/code_validator' script. The number of spaces used for indentation was almost random and
hence impossible to work with. Spacing between functions was not following the 2 empty line rule.
Non-arg assignments with '=' sometimes had no space or 2 spaces. Comma separated elements (lists,
tuples, function args, etc.) often didn't have a space after the comma. A few tab characters were
being used whereas '\t' should have been used. There was trailing whitespace everywhere.
- All functions have been shifted to be before classes.
- All functions/methods have been alphabetically ordered. This is important to follow the code.
- Classes were not always capitalised.
- Removed the executable properties from gui_bieri/analyses/select_model_calc.py.
