restored
new sam-filter option
- read1 and read2 statistics
better cycle statistics
comment removed ...
Bugfix and added error profile for methylation-...
.
ok
sam-stats print quality
\t
added values cycles by cycles
typo
better interpretation of data
better
uff
bugfix
methylation statistics now calculate read1 and ...
working in progress
ok!
ok
ok, renaming functions to the correct ones
ups
added statistics for PE and insert size
approved by EDP
grrr
ok
revisited nt-disaplotipization code
bugfix
d'oh
bugfix: segfault
bump
better ...
new feature of sam-filter, yeah!
arghhh bugfix!
forgot one line
optimization
ok
.
redetect
arghh
removed debugging output
paired!
debug3
debug2
debug
checks
optimization
clearing memory
test
ops
ok now
added new fix strategy
reduced space
progress added
Ok
ok
ops
error in proper pair definition for disaplotipi...
minor changes
done and ready to print
code cleaned
disaplotipization now require a good formatted ...
bugfix ...
added --assume-queryname-order to nt-bam-fixing
better implementation for bam-fixing --fix-baf-...
detailed statistics
fix typo
Added nt-bam-fixing
.
more informations
new statistics file for methylation-histrograms
ok
uff
minor corrections
added reverse cumulative to nt-methylation-hist...
ok
bugfix
added gnuplot output
bugfix on nt-methylation-histograms
Better and better output behaviour for nt-methy...
better output for nt-methylation-histograms
bugfix
ok
ops
bugfix
.
ok
minimal
renamed old type naming types
working on histograms in methylation
typo
Added sandbox/nt-bam-debugging
bam-debugger ready for test!
test useless, return to previous version
test
removed unused variables
finished sirt-seq-trimming
Added sirt-seq-trimming
Makefile.in updated
copyright updated