#15 Can't locate getopts.pl in @INC -> no scaffolds created

[Anonymous]

Originally created by: karsten.... (code.google.com)@gmail.com

What steps will reproduce the problem?
1. any run

What is the expected output? What do you see instead?
Scaffolding of contigs.

[a5_s3] Scaffolding contigs from ORT1.contigs.fasta with SSPACE
[a5_s3] Scaffolding contigs from ORT1.contigs.fasta with SSPACE
[a5] Total contig length 2392153
[a5] raw1raw2: Insert 231, coverage 709.76, expected links 651
[a5] SSPACE -m 25 -n 10 -k 7 -a 0.4 -o 1 -x 0 -l ORT1.library_1.txt -s ORT1.contigs.fasta -b ORT1.raw1raw2 -d ORT1.s3 > ORT1.s3/ORT1.raw1raw2.out
Can't locate getopts.pl in @INC (@INC contains: /Applications/Apps/Science/NGS/A5/bin/SSPACE/dotlib/ /Library/Perl/5.16/darwin-thread-multi-2level /Library/Perl/5.16 /Network/Library/Perl/5.16/darwin-thread-multi-2level /Network/Library/Perl/5.16 /Library/Perl/Updates/5.16.2 /System/Library/Perl/5.16/darwin-thread-multi-2level /System/Library/Perl/5.16 /System/Library/Perl/Extras/5.16/darwin-thread-multi-2level /System/Library/Perl/Extras/5.16 .) at /Applications/Apps/Science/NGS/A5/bin/SSPACE/SSPACE line 54.
mv: rename ORT1.s3/ORT1.raw1raw2.final.scaffolds.fasta to ORT1.crude.scaffolds.fasta: No such file or directory
[a5_s4] Can't find starting crude scaffolds ORT1.crude.scaffolds.fasta

What version of the product are you using? On what operating system?
a5_miseq_macOS_20140113.tar.gz; Mac OS 10.9.2

Please provide any additional information below.
However, thank so much for revising A5 for longer MiSeq reads :-)