[Nemo2-user] shared genetic map

[Nathan W. <nw...@sh...>]

Dear Fred (et al)

I'm a PhD student at the University of Sheffield and have been using Nemo
for a few months now- it's very useful, thank you very much for
developing it!

I've encountered a problem with the genetic map- I'm trying to simulate 6
chromosomes with 100 neutral sites each, then place 2 quant loci on each
chromosome except for one (so it has only neutral sites).

My code has the relevant lines, e.g.
ntrl_loci 600
ntrl_random_genetic_map {{100, 100, 100, 100, 100, 100}}

quanti_random_genetic_map {{100, 100, 100, 100, 100, 100}}
quanti_chromosome_num_locus {{2, 2, 2, 2, 2, 0}}
quanti_loci 10

But when I run it, I get the error
***ERROR*** the genetic map doesn't accept empty chromosomes with 0 loci
***ERROR*** initialization of prototype for trait "quant" failed

Is there a way around this? To have a chromosome with neutral loci but no
quanti loci?

Thanks very much
Nathan
-- 
Nathan White
PhD Student
Dept. Animal & Plant Sciences
University of Sheffield
@NJWhite_Evo