[Nelsonlab-admin] RPMs for the cluster

[Brian O'C. <boc...@uc...>]

Hi Andy & Patrick,

I have a few RPMs that need to be installed on the cluster nodes.  The 
RPM install process works fine on neuron.  However, when I try the 
following:

 >>>>>>>>>>>
sudo shmux -c 'yum update; yum -y install perl-Class-DBI-Pg 
perl-Class-DBI-Pager perl-Class-Accessor-Chained 
perl-Class-DBI-Plugin-Type perl-DBIx-ContextualFetch 
perl-Graph-Writer-GraphViz perl-IO-All perl-XML-LibXML' compute-0-00 
compute-0-01 compute-0-02  compute-0-03 compute-0-04 compute-0-05 
compute-0-06 compute-0-07 compute-0-08 compute-0-09 compute-0-10 
compute-0-11 compute-0-12 compute-0-13 compute-0-14
<<<<<<<<<<<

I get the following error:

 >>>>>>>>>>>
compute-0-00: Gathering header information file(s) from server(s)
compute-0-00: Server: BioPackages (Extra) for Fedora Core 2 - noarch
compute-0-00: Server: BioPackages (Extra) for Fedora Core 2 - noarch
compute-0-00: Server: BioPackages (Stable) for Fedora Core 2 - i386
compute-0-00: Server: BioPackages (Stable) for Fedora Core 2 - noarch
compute-0-00: Server: BioPackages (Testing) for Fedora Core 2 - i386
compute-0-00: Server: BioPackages (Testing) for Fedora Core 2 - noarch
compute-0-00: Server: Fedora Linux 2 - i386 - core
compute-0-00: Server: Fedora Linux 2 - i386 - updates
compute-0-00: Finding updated packages
compute-0-00: Downloading needed headers
compute-0-00: Resolving dependencies
compute-0-00: .Package perl-Log-Dispatch needs perl(Apache::Log), this 
is not available.
compute-0-00! Cannot find a package matching perl-Graph-Writer-GraphViz
compute-0-00! Cannot find a package matching perl-IO-All
       shmux! Waiting for existing children to abort..
...
<<<<<<<<<<<

Here's the output on neuron:

 >>>>>>>>>>>
sudo yum -y install perl-Class-DBI-Pg perl-Class-DBI-Pager 
perl-Class-Accessor-Chained perl-Class-DBI-Plugin-Type 
perl-DBIx-ContextualFetch perl-Graph-Writer-GraphViz perl-IO-All 
perl-XML-LibXML
Password:
Gathering header information file(s) from server(s)
Server: BioPackages (Extra) for Fedora Core 2 - noarch
Server: BioPackages (Extra) for Fedora Core 2 - noarch
Server: BioPackages (Stable) for Fedora Core 2 - i386
Server: BioPackages (Stable) for Fedora Core 2 - noarch
Server: BioPackages (Testing) for Fedora Core 2 - i386
Server: BioPackages (Testing) for Fedora Core 2 - noarch
Server: Fedora Linux 2 - i386 - core
Server: Dag RPM Repository for Fedora Core 2
Server: Fedora Linux 2 - i386 - updates
Finding updated packages
Downloading needed headers
perl-Class-DBI-Pg is installed and is the latest version.
perl-Class-DBI-Pager is installed and is the latest version.
perl-Class-Accessor-Chained is installed and is the latest version.
perl-Class-DBI-Plugin-Type is installed and is the latest version.
perl-DBIx-ContextualFetch is installed and is the latest version.
perl-Graph-Writer-GraphViz is installed and is the latest version.
perl-IO-All is installed and is the latest version.
perl-XML-LibXML is installed and is the latest version.
No actions to take
<<<<<<<<<<<

So there seems to be some problem with the yum setup on the compute 
nodes, the DAG RPM repo is missing on the cluter nodes.  I really need 
to get these packages installed so I appreciate any help you can give.

Thanks

--Brian