Hi Rutger,
As far as I know, the following programs use NCL (though not all use the version that is in Sourceforge - several bundle an old version):
- Phycas,
- Garli (as DZ mentioned),
- TreeView (very old version),
- MrBayes4 was going to use - I'm not sure where they stand,
- phylobase (R package),
- dendropy is not NCL dependent, but if you have NCL and a python adaptor installed then it can use NCL to read tree files much faster than the native python impl.
- I have a few NCL-dependent webservices hosted at http://phylo.bio.ku.edu:5000
all the best,
Mark
On Sep 30, 2010, at 8:35 AM, Rutger Vos wrote:
> Hi,
>
> does anyone know which programs use NCL? In the NeXML manuscript I'd
> like to mention that NeXML support in NCL would be a good thing
> because a number of programs might take advantage of this - but I
> don't know which ones.
>
> Thanks!
>
> Rutger
>
> --
> Dr. Rutger A. Vos
> School of Biological Sciences
> Philip Lyle Building, Level 4
> University of Reading
> Reading
> RG6 6BX
> United Kingdom
> Tel: +44 (0) 118 378 7535
> http://www.nexml.org
> http://rutgervos.blogspot.com
>
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