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From: Guannan <wan...@gm...> - 2015-05-26 23:58:26
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Hello, I have been using Amoscmp-shortreads for a reference-guided assembly, in which nucmer is used. The command in that pipeline is : /usr/local/bin/nucmer --maxmatch --prefix=my_file -l 20 -c 20 my_file.1con my_file.seq.After this, a 71G delta file is generated. But when I wanted to visualize this delta file with mummerplot, it shown 'killed' without any error message. Here is the command I used: mummerplot my_file.delta. What is the problem here and how should I solve it? Thank you. Nan |