Re: [MUMmer-help] problem with mummerplot / gnuplot

[Adam P. <aph...@gm...>]

Hi,
Probably a gnuplot 5 compatibility issue. I've added this to the bug
tracker. Gnuplot v4 is currently recommended for mummer, I have not tested
with v5.

Best,
-Adam


On Wed, Apr 22, 2015 at 11:01 AM, Adriaan Vanheule <
Adr...@ug...> wrote:

> Hi all,
>
>
>
> I am aligning genomes with MUMmer installed on Cygwin, running on my
> Windows 64 bit laptop. The NUCmer and delta-filter steps work fine, but I
> run into problems when I try to run mummerplot. Regardless of the options I
> use (--png, default), I get the following errors:
>
>
>
> gnuplot 5.0 patchlevel 0
>
> Writing filtered delta file out.filter
>
> Reading delta file out.delta.m
>
> Writing plot files out.fplot, out.rplot
>
> Writing gnuplot script out.gp
>
> Rendering plot out.png
>
>
>
> set mouse clipboardformat "[%.0f, %.0f]"
>
>           ^
>
> "out.gp", line 27: wrong option
>
>
>
> WARNING: Unable to run 'gnuplot out.gp',
>
>
>
> This seems like it could be more a gnuplot error than a mummerplot error,
> but I thought I would give it a try anyway. Does anyone know how I could
> resolve this?
>
>
>
> Kind regards
>
> Adriaan
>
>
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