[MUMmer-help] MUMmer on a v5.9 redhat

[Clement D. <ccl...@gm...>]

Hello,
>
I'm trying to install MUMmer on a computer under Redhat version 5.9 and ar
> version 2.17
>
> Can you tell me which version of MUMmer I should download to be able to
> install it please ?
> I've tried the last one and I got the following errors when I typed make
> install :
>
> /usr/bin/g++ -O3 show-diff.cc tigrinc.o delta.o -o
> /home/clement.delestre/scripts/Softs/MUMmer3.23/show-diff; chmod 755
> /home/clement.delestre/scripts/Softs/MUMmer3.23/show-diff
> make[1]: quittant le répertoire «
> /home/clement.delestre/scripts/Softs/MUMmer3.23/src/tigr »
> cd /home/clement.delestre/scripts/Softs/MUMmer3.23/scripts; make all
> make[1]: entrant dans le répertoire «
> /home/clement.delestre/scripts/Softs/MUMmer3.23/scripts »
> /bin/sed  -e 's?__CSH_PATH?/bin/csh?g' \
>                 -e
> 's?__BIN_DIR?/home/clement.delestre/scripts/Softs/MUMmer3.23?g' \
>                 -e
> 's?__SCRIPT_DIR?/home/clement.delestre/scripts/Softs/MUMmer3.23/scripts?g' \
>                 exact-tandems.csh >
> /home/clement.delestre/scripts/Softs/MUMmer3.23/exact-tandems
> chmod 755 /home/clement.delestre/scripts/Softs/MUMmer3.23/exact-tandems
> /bin/sed  -e 's?__PERL_PATH?/usr/bin/perl?g' \
>                 -e
> 's?__SCRIPT_DIR?/home/clement.delestre/scripts/Softs/MUMmer3.23/scripts?g' \
>                 mapview.pl >
> /home/clement.delestre/scripts/Softs/MUMmer3.23/mapview
> chmod 755 /home/clement.delestre/scripts/Softs/MUMmer3.23/mapview
> /bin/sed  -e 's?__PERL_PATH?/usr/bin/perl?g' \
>                 -e
> 's?__SCRIPT_DIR?/home/clement.delestre/scripts/Softs/MUMmer3.23/scripts?g' \
>                 -e
> 's?__BIN_DIR?/home/clement.delestre/scripts/Softs/MUMmer3.23?g' \
>                 mummerplot.pl >
> /home/clement.delestre/scripts/Softs/MUMmer3.23/mummerplot
> chmod 755 /home/clement.delestre/scripts/Softs/MUMmer3.23/mummerplot
> /bin/sed  -e 's?__PERL_PATH?/usr/bin/perl?g' \
>                 -e
> 's?__SCRIPT_DIR?/home/clement.delestre/scripts/Softs/MUMmer3.23/scripts?g' \
>                 -e
> 's?__AUX_BIN_DIR?/home/clement.delestre/scripts/Softs/MUMmer3.23/aux_bin?g'
> \
>                 -e
> 's?__BIN_DIR?/home/clement.delestre/scripts/Softs/MUMmer3.23?g' \
>                  nucmer.pl >
> /home/clement.delestre/scripts/Softs/MUMmer3.23/nucmer
> chmod 755 /home/clement.delestre/scripts/Softs/MUMmer3.23/nucmer
> /bin/sed  -e 's?__PERL_PATH?/usr/bin/perl?g' \
>                 -e
> 's?__SCRIPT_DIR?/home/clement.delestre/scripts/Softs/MUMmer3.23/scripts?g' \
>                 -e
> 's?__AUX_BIN_DIR?/home/clement.delestre/scripts/Softs/MUMmer3.23/aux_bin?g'
> \
>                 -e
> 's?__BIN_DIR?/home/clement.delestre/scripts/Softs/MUMmer3.23?g' \
>                 promer.pl >
> /home/clement.delestre/scripts/Softs/MUMmer3.23/promer
> chmod 755 /home/clement.delestre/scripts/Softs/MUMmer3.23/promer
> /bin/sed  -e 's?__CSH_PATH?/bin/csh?g' \
>                 -e
> 's?__BIN_DIR?/home/clement.delestre/scripts/Softs/MUMmer3.23?g' \
>                 run-mummer1.csh >
> /home/clement.delestre/scripts/Softs/MUMmer3.23/run-mummer1
> chmod 755 /home/clement.delestre/scripts/Softs/MUMmer3.23/run-mummer1
> /bin/sed  -e 's?__CSH_PATH?/bin/csh?g' \
>                 -e
> 's?__BIN_DIR?/home/clement.delestre/scripts/Softs/MUMmer3.23?g' \
>                 run-mummer3.csh >
> /home/clement.delestre/scripts/Softs/MUMmer3.23/run-mummer3
> chmod 755 /home/clement.delestre/scripts/Softs/MUMmer3.23/run-mummer3
> /bin/sed  -e 's?__PERL_PATH?/usr/bin/perl?g' \
>                 nucmer2xfig.pl >
> /home/clement.delestre/scripts/Softs/MUMmer3.23/nucmer2xfig
> chmod 755 /home/clement.delestre/scripts/Softs/MUMmer3.23/nucmer2xfig
> /bin/sed -e 's?__PERL_PATH?/usr/bin/perl?g' \
>                -e
> 's?__SCRIPT_DIR?/home/clement.delestre/scripts/Softs/MUMmer3.23/scripts?g' \
>                -e
> 's?__BIN_DIR?/home/clement.delestre/scripts/Softs/MUMmer3.23?g' \
>                  dnadiff.pl >
> /home/clement.delestre/scripts/Softs/MUMmer3.23/dnadiff
> chmod 755 /home/clement.delestre/scripts/Softs/MUMmer3.23/dnadiff
> make[1]: quittant le répertoire «
> /home/clement.delestre/scripts/Softs/MUMmer3.23/scripts »
>
> If it can help you :
>
> [root@illumina07 MUMmer3.23]# uname -a
> Linux illumina07 2.6.18-348.el5 #1 SMP Wed Nov 28 21:22:00 EST 2012 x86_64
> x86_64 x86_64 GNU/Linux
>
>
> Thank you
> --
>
>
> *Clément DELESTRE**ViroScan3d*
> 8, Avenue Rockefeller
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>