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From: nelcaster7 <nel...@gm...> - 2014-11-25 12:41:00
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Hi all, I am new to mummer/nucmer and to test whether it works for my data, I have input 3 wheat fasta sequences (query) and align it against rice sequence data (all.seq) from MSU7 as a reference seq. I am using this command: nucmer -maxmatch -c 100 -p nucmer all.con Wheat_Genes_3fasta_anna.fasta Unfortunately, I am getting these results at the end of the process: 4: FINISHING DATA sh: nucmer.mgaps: No such file or directory ERROR: postnuc returned non-zero And it returned no results. Any help you could offer is highly appreciated. Thanks Enzo |