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[MUMmer-help] mummeplot error
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From: <The...@cs...> - 2014-07-25 05:43:18
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Hi,
Any idea what's cusing this error when trying to draw a nucmer plot??
Thanks.
Theo
Line=
$mummerplot out.delta
Setting up libexiv2-12 (0.23-1) ...
Setting up libnetpbm10 (2:10.0-15+b1) ...
Setting up librsvg2-common:amd64 (2.36.1-1) ...
Setting up netpbm (2:10.0-15+b1) ...
Setting up psutils (1.17.dfsg-1) ...
Setting up liblensfun-data (0.2.5-2) ...
Setting up liblensfun0 (0.2.5-2) ...
Setting up ufraw-batch (0.18-2) ...
Processing triggers for libgdk-pixbuf2.0-0:amd64 ...
all29c@aahl-02-mel:~/data/015-campy_ass/miseq/2898$ mummerplot out.delta
defined(%hash) is deprecated at /usr/bin/mummerplot line 884.
(Maybe you should just omit the defined()?)
defined(%hash) is deprecated at /usr/bin/mummerplot line 894.
(Maybe you should just omit the defined()?)
defined(%hash) is deprecated at /usr/bin/mummerplot line 981.
(Maybe you should just omit the defined()?)
defined(%hash) is deprecated at /usr/bin/mummerplot line 991.
(Maybe you should just omit the defined()?)
defined(%hash) is deprecated at /usr/bin/mummerplot line 1034.
(Maybe you should just omit the defined()?)
defined(%hash) is deprecated at /usr/bin/mummerplot line 1044.
(Maybe you should just omit the defined()?)
gnuplot 4.6 patchlevel 0
Reading delta file out.delta
Writing plot files out.fplot, out.rplot
Writing gnuplot script out.gp
Forking mouse listener
Rendering plot to screen
Cannot open load file '-geometry'
"-geometry", line 0: util.c: No such file or directory
WARNING: Unable to run 'gnuplot -geometry 500x500+0+0 -title mummerplot out.gp', Inappropriate ioctl for device
Dr Theo R. Allnutt
Project Scientist: Bioinformatics | Food Microbiology and Safety Group
Animal, Food and Health Sciences
CSIRO
Phone: +61 397 313 204 | Fax: +61 3 9731 3201
the...@cs...<mailto:Nar...@cs...> | www.csiro.au<http://www.csiro.au/>
Address: CAFHS, 671 Sneydes Road, Werribee, VIC 3030; and AAHL, PO Bag 24
Geelong VIC 3220.
Dr Theo R. Allnutt
Project Scientist: Bioinformatics | Food Microbiology and Safety Group
Animal, Food and Health Sciences
CSIRO
Phone: +61 397 313 204 | Fax: +61 3 9731 3201
the...@cs...<mailto:Nar...@cs...> | www.csiro.au<http://www.csiro.au/>
Address: CAFHS, 671 Sneydes Road, Werribee, VIC 3030; and AAHL, PO Bag 24
Geelong VIC 3220.
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