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From: Roberta R. <rob...@ic...> - 2013-12-23 14:32:15
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> Hi everybody, > > I’m new in bioinformatics and I’m trying to follow some ways to do assemblies. > I’m using MacOS 10.9.1 mavericks and I can’t install MUMmer. During installation process I have the following messages … > > Could you help me? > > Thank you in advance > > > combineMUMs.cc:109:27: warning: conversion from string literal to 'char *' is > deprecated [-Wdeprecated-writable-strings] > char * Error_File_Name = DEFAULT_ERROR_FILE_NAME; > ^ > combineMUMs.cc:26:38: note: expanded from macro 'DEFAULT_ERROR_FILE_NAME' > #define DEFAULT_ERROR_FILE_NAME "witherrors.gaps" > ^ > combineMUMs.cc:135:24: warning: conversion from string literal to 'char *' is > deprecated [-Wdeprecated-writable-strings] > char * Query_Suffix = "Query"; > ^ > combineMUMs.cc:145:22: warning: conversion from string literal to 'char *' is > deprecated [-Wdeprecated-writable-strings] > char * Ref_Suffix = "Ref"; > ^ > > > > mgaps.cc:533:20: warning: conversion from string literal to 'char *' is > deprecated [-Wdeprecated-writable-strings] > label = "#\n"; > ^ > mgaps.cc:620:19: warning: conversion from string literal to 'char *' is > deprecated [-Wdeprecated-writable-strings] > label = "#\n"; > > > > > > repeat-match.cc:850:43: warning: '&&' within '||' [-Wlogical-op-parentheses] > || i > String_Separator && j > String_Separator) > ~~ ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ > repeat-match.cc:850:43: note: place parentheses around the '&&' expression to > silence this warning > || i > String_Separator && j > String_Separator) > ^ > ( ) > > > show-coords.cc:799:12: warning: conversion from string literal to 'char *' is > deprecated [-Wdeprecated-writable-strings] > type = "NUCMER"; > ^ > show-coords.cc:801:12: warning: conversion from string literal to 'char *' is > deprecated [-Wdeprecated-writable-strings] > type = "PROMER"; > ^ > show-coords.cc:803:12: warning: conversion from string literal to 'char *' is > deprecated [-Wdeprecated-writable-strings] > type = "NULL"; > ^ |