[MUMmer-help] MUMmer installation on MacOS 10.9.1

[Roberta R. <rob...@ic...>]

> Hi everybody,
> 
> I’m new in bioinformatics and I’m trying to follow some ways to do assemblies.
> I’m using MacOS 10.9.1 mavericks and I can’t install MUMmer. During installation process I have the following messages …
> 
> Could you help me?
> 
> Thank you in advance
> 
> 
> combineMUMs.cc:109:27: warning: conversion from string literal to 'char *' is
>       deprecated [-Wdeprecated-writable-strings]
> char  * Error_File_Name = DEFAULT_ERROR_FILE_NAME;
>                           ^
> combineMUMs.cc:26:38: note: expanded from macro 'DEFAULT_ERROR_FILE_NAME'
> #define  DEFAULT_ERROR_FILE_NAME     "witherrors.gaps"
>                                      ^
> combineMUMs.cc:135:24: warning: conversion from string literal to 'char *' is
>       deprecated [-Wdeprecated-writable-strings]
> char  * Query_Suffix = "Query";
>                        ^
> combineMUMs.cc:145:22: warning: conversion from string literal to 'char *' is
>       deprecated [-Wdeprecated-writable-strings]
> char  * Ref_Suffix = "Ref";
>                      ^
> 
> 
> 
> mgaps.cc:533:20: warning: conversion from string literal to 'char *' is
>       deprecated [-Wdeprecated-writable-strings]
>            label = "#\n";
>                    ^
> mgaps.cc:620:19: warning: conversion from string literal to 'char *' is
>       deprecated [-Wdeprecated-writable-strings]
>           label = "#\n";
> 
> 
> 
> 
> 
> repeat-match.cc:850:43: warning: '&&' within '||' [-Wlogical-op-parentheses]
>                   || i > String_Separator && j > String_Separator)
>                   ~~ ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
> repeat-match.cc:850:43: note: place parentheses around the '&&' expression to
>       silence this warning
>                   || i > String_Separator && j > String_Separator)
>                                           ^
>                      (                                           )
> 
> 
> show-coords.cc:799:12: warning: conversion from string literal to 'char *' is
>       deprecated [-Wdeprecated-writable-strings]
>     type = "NUCMER";
>            ^
> show-coords.cc:801:12: warning: conversion from string literal to 'char *' is
>       deprecated [-Wdeprecated-writable-strings]
>     type = "PROMER";
>            ^
> show-coords.cc:803:12: warning: conversion from string literal to 'char *' is
>       deprecated [-Wdeprecated-writable-strings]
>     type = "NULL";
>            ^