#17 Nucmer generated core dump.

[Won Cheol Yim]

Dear all,

nucmer -maxmatch all_tigs.fa all_tigs.fa -p all_tigs_self

And it generated core dump file.

I ran with fasta file width 60 and width 0 and the result is same.

Is there any way to resolve this?

1: PREPARING DATA
2,3: RUNNING mummer AND CREATING CLUSTERS

reading input file "all_tigs_self.ntref" of length 456542339

construct suffix tree for sequence of length 456542339

(maximum reference length is 536870908)

(maximum query length is 4294967295)

process 4565423 characters per dot

.....................................................................................ERROR: mummer and/or mgaps returned non-zero