Recent changes to Home

Home modified by Spiros

Spiros — Sun, 19 May 2013 09:39:44 -0000

--- v6
+++ v7
@@ -1,23 +1,25 @@
 Checkout the code from 
->svn...???
+>svn://svn.code.sf.net/p/ms-and/code

 **Linux**:

 1. compile the code: 
 >g++ -o msand main.cpp

-2. run the sample: 
++ run the sample: 
 >./msand ../samples/results.txt ../samples/chr18_1st.gff ../samples/chr18_3rd.gff ../samples/chr18_wb.gff

-3. View the results using (Nimblegen or) an editor in the file: 
++ View the results using (Nimblegen or) an editor in the file: 
 >../samples/results.txt

 **Windows** (from within Visual Studio):

 1. Load and build *embryo.sln*
-+ Set the program arguments by right clicking on the project file *???* and ... to run the sample:
->../samples/results.txt ../samples/chr18_1st.gff ../samples/chr18_3rd.gff ../samples/chr18_wb.gff
++ Set the program arguments by right clicking on the project *embryo* --> Properties --> Debugging --> Command Arguments:
+>../../samples/results.txt ../../samples/chr18_1st.gff ../../samples/chr18_3rd.gff ../../samples/chr18_wb.gff

 + Run the program (F5)
-+ View the results in the file: ../samples/results.txt (if you have Nimblegen, even better)
+
++ View the results using (Nimblegen or) an editor in the file: 
+>../../samples/results.txt

Home modified by Spiros

Spiros — Sun, 19 May 2013 09:04:29 -0000

--- v5
+++ v6
@@ -1,5 +1,5 @@
 Checkout the code from 
->sv
+>svn...???

 **Linux**:

@@ -16,8 +16,8 @@
 **Windows** (from within Visual Studio):

 1. Load and build *embryo.sln*
-+ Set the program arguments by right clicking on the project file *embryo.plj* and ... to run the sample:
->./msand ../samples/results.txt ../samples/chr18_1st.gff ../samples/chr18_3rd.gff ../samples/chr18_wb.gff
++ Set the program arguments by right clicking on the project file *???* and ... to run the sample:
+>../samples/results.txt ../samples/chr18_1st.gff ../samples/chr18_3rd.gff ../samples/chr18_wb.gff

 + Run the program (F5)
 + View the results in the file: ../samples/results.txt (if you have Nimblegen, even better)

Home modified by Spiros

Spiros — Sun, 19 May 2013 09:02:38 -0000

--- v4
+++ v5
@@ -1,7 +1,5 @@
-Checkout the code from SVN:
-
->svn...
-
+Checkout the code from 
+>sv

 **Linux**:

Home modified by Spiros

Spiros — Sun, 19 May 2013 09:00:55 -0000

--- v3
+++ v4
@@ -1,6 +1,7 @@
 Checkout the code from SVN:

 >svn...
+

 **Linux**:

@@ -10,12 +11,15 @@
 2. run the sample: 
 >./msand ../samples/results.txt ../samples/chr18_1st.gff ../samples/chr18_3rd.gff ../samples/chr18_wb.gff

-3. View the results in the file: 
+3. View the results using (Nimblegen or) an editor in the file: 
 >../samples/results.txt

-From within Visual Studio:
-1. Load the solution:
-2. Build the solution:
-3. Set the program arguments by clicking on: …
-4. Run the program by:
-5. View the results in the file: ../samples/results.txt (if you have Nimblegen, even better)
+
+**Windows** (from within Visual Studio):
+
+1. Load and build *embryo.sln*
++ Set the program arguments by right clicking on the project file *embryo.plj* and ... to run the sample:
+>./msand ../samples/results.txt ../samples/chr18_1st.gff ../samples/chr18_3rd.gff ../samples/chr18_wb.gff
+
++ Run the program (F5)
++ View the results in the file: ../samples/results.txt (if you have Nimblegen, even better)

Home modified by Spiros

Spiros — Sun, 19 May 2013 08:57:55 -0000

--- v2
+++ v3
@@ -1,18 +1,17 @@
-Welcome to your wiki!
+Checkout the code from SVN:

-This is the default page, edit it as you see fit. To add a new page simply reference it within brackets, e.g.: [SamplePage].
+>svn...

-The wiki uses [Markdown](/p/ms-and/wiki/markdown_syntax/) syntax.
+**Linux**:

-[[members limit=20]]
-[[download_button]]
+1. compile the code: 
+>g++ -o msand main.cpp

-Compile:
+2. run the sample: 
+>./msand ../samples/results.txt ../samples/chr18_1st.gff ../samples/chr18_3rd.gff ../samples/chr18_wb.gff

-Linux:
-1. compile the code: g++ -o msand main.cpp
-2. run the sample: ./msand ../samples/results.txt ../samples/chr18_1st.gff ../samples/chr18_3rd.gff ../samples/chr18_wb.gff
-3. View the results in the file: ../samples/results.txt
+3. View the results in the file: 
+>../samples/results.txt

 From within Visual Studio:
 1. Load the solution:

Home modified by Spiros

Spiros — Sun, 19 May 2013 08:16:29 -0000

--- v1
+++ v2
@@ -6,3 +6,17 @@

 [[members limit=20]]
 [[download_button]]
+
+Compile:
+
+Linux:
+1. compile the code: g++ -o msand main.cpp
+2. run the sample: ./msand ../samples/results.txt ../samples/chr18_1st.gff ../samples/chr18_3rd.gff ../samples/chr18_wb.gff
+3. View the results in the file: ../samples/results.txt
+
+From within Visual Studio:
+1. Load the solution:
+2. Build the solution:
+3. Set the program arguments by clicking on: …
+4. Run the program by:
+5. View the results in the file: ../samples/results.txt (if you have Nimblegen, even better)

Home modified by Spiros

Spiros — Wed, 15 May 2013 18:25:41 -0000

Welcome to your wiki!

This is the default page, edit it as you see fit. To add a new page simply reference it within brackets, e.g.: [SamplePage].

The wiki uses Markdown syntax.

Project Members:

Spiros (admin)