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mpiBLAST
Bugs
mpiBLAST Bugs
Status:
Beta
Brought to you by:
dylanlin2000
,
jsarchuleta
,
koadman
,
lcarey
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v1.2.1
v1.3.0
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v1.4
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v1.2.1 (1)
v1.3.0 (9)
v1.3.0 performance (2)
v1.4 (1)
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open (17)
open-fixed (1)
open-later (1)
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lcarey (2)
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42
mpiformatdb reordering is broken on >2GB
v1.4
open
2005-08-19
2005-08-19
5
41
mpiformatdb -i stdin doesn't work
v1.3.0
open
Aaron Darling
2005-06-11
2005-06-11
5
40
-J option breaks command line parse
v1.3.0
open
Aaron Darling
2005-06-08
2005-06-08
5
39
mpiformatdb doesn't work when replacing a db
None
open
2005-06-06
2005-06-06
5
38
mpiformatdb %complete screen update
v1.3.0
open
2005-06-06
2005-06-06
2
35
when Shared==Local, disable_mpi_db
v1.3.0 performance
open
Aaron Darling
2005-05-12
2005-05-12
6
34
we lock list twice, dont' think we need to
None
open
2005-05-12
2005-05-12
5
33
1.3.0 scheduler assigns copy operations too aggressively
v1.3.0
open
2005-05-10
2005-05-10
5
32
--copy-via=mpi broken
v1.3.0
open-fixed
Aaron Darling
2005-04-29
2005-05-19
5
31
allow --copy-via=none when Shared != Local
v1.3.0
open
2005-04-21
2005-04-21
5
29
Query multiple databases
None
open
2005-04-18
2005-04-18
5
25
increase the number of allowed fragments
v1.3.0
open
2005-04-15
2005-04-15
5
22
initial search space calculation is expensive
v1.3.0 performance
open
2005-04-12
2005-04-12
5
18
configure doesn't check if E-value patch is applied
v1.3.0
open-postponed
Aaron Darling
2005-04-12
2005-05-19
5
17
# workers > # fragments fails
v1.3.0
open
Aaron Darling
2005-04-12
2005-04-12
8
14
mpiformatdb creates illegal databases
None
open
Aaron Darling
2004-10-03
2004-11-30
2
9
megablast & psiblast
None
open-later
2004-09-22
2004-11-30
1
5
make test
None
open
Lucas Carey
2004-09-22
2004-09-22
5
2
auto-patching the ncbi toolkit
v1.2.1
open
Lucas Carey
2004-09-22
2004-09-22
5
1
non alphanumeric chars in error message for short queries
None
open
2004-02-26
2004-02-26
5
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