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Bernhard Bodenstorfer
committed
[104c37]
revised plans concerning other operating systems
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Bernhard Bodenstorfer
committed
[56bd26]
fixed one-too-many SNP added in linear multi forward step
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Bernhard Bodenstorfer
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[ccd30e]
more informative warning message
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Bernhard Bodenstorfer
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[1cca08]
Version 1.2.24
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Bernhard Bodenstorfer
committed
[b5951c]
prefer local variable to pointer and new for simplicity, robustness and speed
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Bernhard Bodenstorfer
committed
[d3c7b2]
allocate models on stack, not heap, for simplicity, robustness and speed
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Bernhard Bodenstorfer
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[4249f0]
added comment and removed a nit of junk
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Bernhard Bodenstorfer
committed
[c28168]
removed undocumented parameter adjustment
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Bernhard Bodenstorfer
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[45b052]
always catch exceptions by reference
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Bernhard Bodenstorfer
committed
[602c96]
refactored MA to use vector<Model> models instead of Model* models for robustness and simplification
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Bernhard Bodenstorfer
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[f40e92]
added code remark
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Bernhard Bodenstorfer
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[e83d13]
added newSNP parameter to makeMultiForwardStep and cleaned up code a bit
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Bernhard Bodenstorfer
committed
[bc553c]
code cleanliness improvements
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Bernhard Bodenstorfer
committed
[2c883f]
added documentation for fast multi-forward
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Bernhard Bodenstorfer
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[34396c]
adapted to Model.makeMultiForwardStep additional parameter newSNP
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Bernhard Bodenstorfer
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[874165]
remove counterintuitive reference to memetic algorithm's forward step max from score test
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Bernhard Bodenstorfer
committed
[0eb8af]
improved readability
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Bernhard Bodenstorfer
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[91047d]
added forgotten %u
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Bernhard Bodenstorfer
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[c09b7a]
added reviewer remark
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Bernhard Bodenstorfer
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[a377ba]
Version 1.2.23
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Bernhard Bodenstorfer
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[c52dec]
add 1 to current model size in order to test what would be if the model was 1 bigger
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Bernhard Bodenstorfer
committed
[f05ed8]
Version 1.2.22
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Bernhard
committed
[0e59ba]
use iterator instead const_iterator for older stdlibc++
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Bernhard Bodenstorfer
committed
[93f654]
fixed typo
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Bernhard Bodenstorfer
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[406f95]
include cstddef for size_t
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Bernhard Bodenstorfer
committed
[95af13]
increased buffer length
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Bernhard Bodenstorfer
committed
[7acf43]
changed initial memetic population to avoid too small models
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Bernhard Bodenstorfer
committed
[a3e140]
changed default npProbabilityFunction
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Bernhard Bodenstorfer
committed
[40b92a]
overwrite log file instead of appending
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Bernhard Bodenstorfer
committed
[e99b17]
utility to iteratively choose SNPs guided by probabilities
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Bernhard Bodenstorfer
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[0935fb]
avoid unnecessary copy by pass by reference
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Bernhard Bodenstorfer
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[041253]
version 1.2.21
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Bernhard Bodenstorfer
committed
[3180a3]
Improved memetic initial population choice.
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Bernhard Bodenstorfer
committed
[a4eaa3]
Changed S²_h² estimator formula again.
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Bernhard Bodenstorfer
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[02c4af]
Version 1.2.19
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Bernhard Bodenstorfer
committed
[0b1082]
Fix: added forgotten factor 4 in S²_h².
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Bernhard Bodenstorfer
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[4eaa0d]
Version 1.2.18.
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Bernhard Bodenstorfer
committed
[19fa01]
Version 1.2.17.
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Bernhard Bodenstorfer
committed
[0e43ba]
Updated heritability variance estimator to S²_h².
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Bernhard Bodenstorfer
committed
[246a4d]
Added calculateQTy and (made public) calculateRank.
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Bernhard Bodenstorfer
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[578ea8]
Version 1.2.16 added periodic logging of memetic population snapshots.
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Bernhard Bodenstorfer
committed
[0148d7]
clarified iteration
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Bernhard Bodenstorfer
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[7157c9]
added heritability_confidence_threshold
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Bernhard Bodenstorfer
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[a6f02e]
Version 1.2.15
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Bernhard Bodenstorfer
committed
[ce1c37]
added code review remark
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Bernhard Bodenstorfer
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[3278a9]
added heritability_confidence_threshold
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Bernhard Bodenstorfer
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[4584bd]
Version 1.2.14.
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Bernhard Bodenstorfer
committed
[e9ddd5]
Changed three configuration default values:
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Bernhard Bodenstorfer
committed
[818513]
New class: util::Power.
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Bernhard Bodenstorfer
committed
[b01943]
Added Vector::maxNorm()
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Bernhard Bodenstorfer
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[3ef57b]
o Added initialModelHaircut and thus a paramete...
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Bernhard Bodenstorfer
committed
[886511]
Adapted to changes in Model.
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Bernhard Bodenstorfer
committed
[ff1f73]
Added initialModelHaircut parameter to memetic ...
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Bernhard Bodenstorfer
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[35cc7d]
Version 1.2.13.
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Bernhard Bodenstorfer
committed
[7c6d5b]
Adapted to MSC caching scheme in Model.
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Bernhard Bodenstorfer
committed
[e01ebe]
Adapted to Model changes:
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Bernhard Bodenstorfer
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[6c019f]
Version 1.2.12.
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Bernhard Bodenstorfer
committed
[95fddd]
Adapted to renamed Model methods and explicit c...
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Bernhard Bodenstorfer
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[069830]
Adapted to Model changes:
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Bernhard Bodenstorfer
committed
[049701]
Majour streamlining around MSC calculation:
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Bernhard Bodenstorfer
committed
[60842b]
Majour streamlining around MSC calculation:
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Bernhard Bodenstorfer
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[60584c]
Version 1.2.11.
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Bernhard Bodenstorfer
committed
[3f655e]
For models[0] also perform greedy step 2.
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Bernhard Bodenstorfer
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[95e35b]
Use parameter->selectionCriterium in Model::com...
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Bernhard Bodenstorfer
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[a92342]
Redesign of Artur's method computeMSCfalseRegre...
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Bernhard Bodenstorfer
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[9a8021]
Version 1.2.10
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Bernhard Bodenstorfer
committed
[c2242e]
Bugfix of erroneous variable assignment.
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Bernhard Bodenstorfer
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[383849]
Bug-fix of erroneous variable assignment.
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Bernhard Bodenstorfer
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[16e8cb]
Moved variable forward_step_max from [model_sel...
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Bernhard Bodenstorfer
committed
[229201]
Re-implemented parameter [model_selection] mult...
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Bernhard Bodenstorfer
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[aad16c]
Retyped some config variables from int to size_t.
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Bernhard Bodenstorfer
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[ec729a]
Added line logging lucky finds improving the best.
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Bernhard Bodenstorfer
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[20e576]
Version 1.2.9.
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Bernhard Bodenstorfer
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[299cf5]
Added warning when adding null model.
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Bernhard Bodenstorfer
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[1d1915]
Merged some changes by Artur.
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Bernhard Bodenstorfer
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[fb6d8a]
Improved documentation.
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Bernhard Bodenstorfer
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[39d55b]
Made model numbers size_t.
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Bernhard Bodenstorfer
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[2fe9da]
Remove using namespace from header files.
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Bernhard Bodenstorfer
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[9e3971]
o Replaced npInverseC by far more flexible npPr...
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Bernhard Bodenstorfer
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[ed01c1]
Overload parse method to assess parsing success.
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Bernhard Bodenstorfer
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[d399a3]
Replaced npInverseC by far more flexible npProb...
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Bernhard Bodenstorfer
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[c13435]
Removed using namespace std from header files.
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Bernhard Bodenstorfer
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[e64532]
Version 1.2.8
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Bernhard Bodenstorfer
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[1b5713]
Added npFunctionC facility to shape initial mem...
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Bernhard Bodenstorfer
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[0dec52]
Version 1.2.7
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Bernhard Bodenstorfer
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[49a19f]
Version 1.2.6 and buildinfo const.
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Bernhard Bodenstorfer
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[4e6f95]
Merge branch 'master' of ssh://git.code.sf.net/...
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Bernhard Bodenstorfer
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[8ed714]
Version 1.2.6 and restore some further past his...
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Bernhard Bodenstorfer
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[6f4a80]
Bug fix: repeated access to the same va_list.
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Bernhard Bodenstorfer
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[4af7dc]
Added parameter fastForwardModelsNo.
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Bernhard Bodenstorfer
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[6fa9d0]
Version 1.2.5.
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Bernhard Bodenstorfer
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[ba35f9]
Fixed documentation bug.
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Bernhard Bodenstorfer
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[9850c9]
Added parameter pLocalExchangeTrial.
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Bernhard Bodenstorfer
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[803d82]
Exchanged order to make gslcblas only the last ...
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Bernhard Bodenstorfer
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[201512]
Added parameter pLocalExchangeTrial.
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Bernhard Bodenstorfer
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[b5e7e3]
Version 1.2.4.
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Bernhard Bodenstorfer
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[b0f048]
Clarified some documentation.