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File Date Author Commit
 R 2022-08-03 Stefan Schlager Stefan Schlager [155287] deformGrid*, lineplot: make adaptions needed fo...
 data 2013-08-02 schlager schlager [a246b0] added additional example data (landmarks and a ...
 inst 2021-09-08 Stefan Schlager Stefan Schlager [741bd0] Updated NEWS.Rd
 man 2022-08-03 Stefan Schlager Stefan Schlager [155287] deformGrid*, lineplot: make adaptions needed fo...
 src 2021-07-16 Stefan Schlager Stefan Schlager [99e570] rmVertex: add support for tmesh3d
 tests 2022-09-08 Stefan Schlager Stefan Schlager [9e2f43] relWarps: adapt to new Matrix version.
 .Rbuildignore 2015-06-25 Stefan Schlager Stefan Schlager [0cc978] added debian folder
 .gitignore 2015-05-27 Stefan Schlager Stefan Schlager [0393ad] bumped version
 .travis.yml 2020-06-26 Stefan Schlager Stefan Schlager [3e10fd] travis: try all source dependencies
 DESCRIPTION 2022-05-31 Stefan Schlager Stefan Schlager [4873bb] computeArea: replace rgeos functions with sf eq...
 NAMESPACE 2022-05-31 Stefan Schlager Stefan Schlager [dec9e2] NEW: computeArea
 README.md 2022-06-03 Stefan Schlager Stefan Schlager [0acb27] Updated README: added system deps for Linux.

Read Me

Morpho Travis Build Status License Downloads

Morpho provides a rich toolset for Geometric Morphometrics and mesh processing in R. This includes (among other stuff) mesh deformations based on reference points, permutation tests, detection of outliers, processing of sliding semi-landmarks, im- and export of a variety of triangular surface mesh files.

Installation of the R-package Morpho from CRAN:

Prerequisites for Debian/Ubuntu (needed to build dependency package sf)

sudo apt install libudunits2-dev libgeos-dev

Within R:

install.packages("Morpho")

Installation of the R-package Morpho (development snapshot) using devtools:

Install prerequisites
  1. Install devtools from within R (Ubuntu/Debian users will have to install libcurl4-gnutls-dev beforehand):

    install.packages("devtools")
    

    Make sure to have the latest versions of Rcpp and RcppArmadillo installed!!

  2. Install build environment

    • Windows: Install latest version of Rtools
      During installation of Rtools make sure to install the toolchain, and to select "Edit the system path" (and confirming the installers suggestions).
    • OSX: Install XCODE
  3. Install prerequisites for Debian/Ubuntu (needed to build dependency package sf)

sudo apt install libudunits2-dev libgeos-dev

Install Morpho

Run the following command in R:

require(devtools)
install_github("zarquon42b/Morpho")
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