Re: [moose-devel] DifShell and DifBuffer

[Joanna Jedrzejewska-S. <jje...@gm...>]

Dear Subhasis,
Thank you for your e-mail.
The problem about DifBuffer is this:
To realistically model calcium dynamics one needs calcium diffusion, diffusible buffers and extrusion pumps. These mechanisms are implemented in following objects: DifShell, DifBuffer, and mmPump and hillPump (and possibly some other pumps), and modellers refer to them colloquially as "DifShells". Unfortunately DifShell objects alone are quite useless.
If you add them, we'll be really grateful.
Best regards,
Joanna Jedrzejewska-Szmek
________________________________________
From: Subhasis Ray <ray...@gm...>
Sent: Tuesday, February 3, 2015 8:44 PM
To: Moose development issues
Cc: Subhasis Ray
Subject: Re: [moose-devel] DifShell and DifBuffer

Hi,
 This has been a pending feature for quite some time. DifShell has a buffer
message, but as you point out, the DifBuffer class has not been ported yet.
I have added it to the issue tracker as a feature request and hopefully it
will be added soon.

Best,
- Subhasis

On Mon, Feb 2, 2015 at 2:24 PM, Zbigniew Jędrzejewski-Szmek <
zje...@gm...> wrote:

> Hi,
>
> DifShells seem to be missing DifBuffers. To simulate calcium dynamics
> properly,
> DifBuffers are required. Commits which added DifShell did not add that
> part.
> Calcium Pump objects are also missing.
>
> Thank you,
> Zbyszek
>
>
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