Output function abundance table?
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mocat-pipeline
hello, I run following scripts to get the function profiles.
MOCAT.pl -sf my.samples -rtf
MOCAT.pl -sf my.samples -a
MOCAT.pl -sf my.samples -gp assembly
MOCAT.pl -sf my.samples -make_gene_catalog -assembly_type assembly
MOCAT.pl -sf my.samples -annotate_gene_catalog
MOCAT.pl -sf my.samples -s my.samples.padded -identity 95
MOCAT.pl -sf my.samples -f my.samples.padded -identity 95
MOCAT.pl -sf my.samples -p my.samples.padded -identity 95 -mode functional
I want to get the abundance table for the functional analysis,such as attachments. I don't know how to do it.
Thanks!