mira gracefully gave up after encountering an :
//an hint on what happened would be nice//
Internal logic/programming/debugging error (sigh this should not have happened).
->Thrown: void Contig::reduceReadsAtCoveragePeaks(ccctype_t avgcov, vector<uint8> & peakindicator, unordered_set<readid_t> & readsremoved)
Thank you for noticing that this is NOT a crash, but a
controlled program stop.
Failure, wrapped MIRA process aborted.
in this context :
On: Linux vk10464 2.6.32-41-generic #94-Ubuntu SMP Fri Jul 6 18:00:34 UTC 2012 x86_64 GNU/Linux
8 CPU + 102Gb RAM
40x106 solexa end-paired solexa reads in fastqformatted file = 14.1 Gb
parameters: COMMON_SETTINGS -GENERAL:number_of_threads=8, -NW:cmrnl=no, -NW:cnfs=no ,-HS:ldn=yes,-DIR:trt=////tmp SOLEXA_SETTINGS -AL
IGN:min_score=10 , bip=30
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