Menu

#38 MIRA failed without throwing error

4.0.1
open
None
2018-10-25
2018-10-24
No

Hello,
I have Illumina paired end reads. And also I have a reference genome. I am doing assembly of my reads using reference genome usingMIRA . I have created manifest file as in the manual. but it is showing failed without any error information. Below I am attaching my manifest file and Mira log file. Please help me in solving this.

2 Attachments

Discussion

  • Bastien Chevreux

    The log says MIRA was killed. I suspect the OS did that, the reason might be MIRA was using too much memory. Check the limits which are available on your system. And also whether the project you have might not be too large for MIRA.

     
  • Santhosh Hegde

    Santhosh Hegde - 2018-10-25

    I have 125GB RAM. 150GB ROM. The Genome size of my sample is 600Mb. I have 160 Million reads 150x2 chemestry. Is this OK for MIRA?

     

Log in to post a comment.

Want the latest updates on software, tech news, and AI?
Get latest updates about software, tech news, and AI from SourceForge directly in your inbox once a month.