Recent changes to GeneratingHaplotypesWithFastsimcoal

GeneratingHaplotypesWithFastsimcoal modified by Christos Vlachos

Christos Vlachos — Tue, 03 Jul 2018 10:12:11 -0000

--- v14
+++ v15
@@ -1,7 +1,7 @@
 [TOC]
 #1 Introduction
 As an input MimicrEE2 requires haplotypes. Ideally this haplotypes would be derived from sequencing multiple individual of a population for the organism of interest.
-However such extensive sequence data will frequently not be available for many organism. Thus one elegant solution is to simulate the input haplotypes. 
+However such extensive sequence data will frequently not be available for many organisms. Thus one elegant solution is to simulate the input haplotypes. 
 One very useful tool for simulating haplotypes is fastsimcoal http://cmpg.unibe.ch/software/fastsimcoal2/ 
 This tool allows to simulate haplotypes under complex evolutionary scenarios. 
 MimicrEE2 allows converting the output of fastsimcoal (.arp files) into the haplotype format supported by MimicrEE2.
@@ -75,7 +75,7 @@
 ~~~~~~

 #3 Haplotypes for multiple chromosomes
-In order to obtain haplotypes for multiple chromosomes we recommend to simulate the haplotypes for each chromosome separately and concatenate the MimicrEE2 haplotypes.
+In order to obtain haplotypes for multiple chromosomes we recommend to simulating the haplotypes for each chromosome separately and concatenating the MimicrEE2 haplotypes.

 Given the two par files (fastimcoal paramters)

GeneratingHaplotypesWithFastsimcoal modified by Christos Vlachos

Christos Vlachos — Wed, 27 Jun 2018 10:11:28 -0000

--- v13
+++ v14
@@ -1,15 +1,15 @@
 [TOC]
 #1 Introduction
-As an input MimicrEE2 requires haplotypes. Ideally this haplotypes would be derived from sequencing multiple inidividual of a population for the organism of interest.
+As an input MimicrEE2 requires haplotypes. Ideally this haplotypes would be derived from sequencing multiple individual of a population for the organism of interest.
 However such extensive sequence data will frequently not be available for many organism. Thus one elegant solution is to simulate the input haplotypes. 
 One very useful tool for simulating haplotypes is fastsimcoal http://cmpg.unibe.ch/software/fastsimcoal2/ 
-This tool allows to simulate haplotypes under complex evolutionary scenarious. 
-MimcirEE2 allows converting the output of fastsimcoal (.arp files) into the haplotpye format supported by MimcrEE2.
+This tool allows to simulate haplotypes under complex evolutionary scenarios. 
+MimicrEE2 allows converting the output of fastsimcoal (.arp files) into the haplotype format supported by MimicrEE2.

 #2 Haplotypes for a single chromosome

 ## run fastsimcoal to obtain .arp files
-First its necessary to generate one of the input files for fastsimcoal such as a .par file (contains the parameters for the evolutionary scenarious that should be simulated).
+First its necessary to generate one of the input files for fastsimcoal such as a .par file (contains the parameters for the evolutionary scenarios that should be simulated).
 For details see the fastsimcoal manual http://cmpg.unibe.ch/software/fastsimcoal2/ 

 In this walkthrough we use the following par file https://sourceforge.net/projects/mimicree2/files/fastsimcoal/20kb-chr1.txt/
@@ -20,7 +20,7 @@
 fsc26 -i 20kb-chr1.txt -n 1 -q
 ~~~~~~

-We obtain an apr-file such as the following: https://sourceforge.net/projects/mimicree2/files/fastsimcoal/20kb-chr1_1_1.arp
+We obtain an arp-file such as the following: https://sourceforge.net/projects/mimicree2/files/fastsimcoal/20kb-chr1_1_1.arp

@@ -75,7 +75,7 @@
 ~~~~~~

 #3 Haplotypes for multiple chromosomes
-In order to obtain haplotypes for multiple chromosomes we recommend to simulate the haplotypes for each chromosome seprately and concatenate the MimicrEE2 haplotypes.
+In order to obtain haplotypes for multiple chromosomes we recommend to simulate the haplotypes for each chromosome separately and concatenate the MimicrEE2 haplotypes.

 Given the two par files (fastimcoal paramters)

GeneratingHaplotypesWithFastsimcoal modified by Robert Kofler

Robert Kofler — Mon, 25 Jun 2018 14:23:42 -0000

--- v12
+++ v13
@@ -1,11 +1,12 @@
-# Introduction
+[TOC]
+#1 Introduction
 As an input MimicrEE2 requires haplotypes. Ideally this haplotypes would be derived from sequencing multiple inidividual of a population for the organism of interest.
 However such extensive sequence data will frequently not be available for many organism. Thus one elegant solution is to simulate the input haplotypes. 
 One very useful tool for simulating haplotypes is fastsimcoal http://cmpg.unibe.ch/software/fastsimcoal2/ 
 This tool allows to simulate haplotypes under complex evolutionary scenarious. 
 MimcirEE2 allows converting the output of fastsimcoal (.arp files) into the haplotpye format supported by MimcrEE2.

-# haplotypes for a single chromosome
+#2 Haplotypes for a single chromosome

 ## run fastsimcoal to obtain .arp files
 First its necessary to generate one of the input files for fastsimcoal such as a .par file (contains the parameters for the evolutionary scenarious that should be simulated).
@@ -73,7 +74,7 @@
 2L 1515    T   T/C TT T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
 ~~~~~~

-# haplotypes for multiple chromosomes
+#3 Haplotypes for multiple chromosomes
 In order to obtain haplotypes for multiple chromosomes we recommend to simulate the haplotypes for each chromosome seprately and concatenate the MimicrEE2 haplotypes.

 Given the two par files (fastimcoal paramters)

GeneratingHaplotypesWithFastsimcoal modified by Robert Kofler

Robert Kofler — Thu, 21 Jun 2018 08:34:17 -0000

--- v11
+++ v12
@@ -8,7 +8,8 @@
 # haplotypes for a single chromosome

 ## run fastsimcoal to obtain .arp files
-First its necessary to generate one of the input files for fastsimcoal such as a .par file. For details see the fastsimcoal manual http://cmpg.unibe.ch/software/fastsimcoal2/ 
+First its necessary to generate one of the input files for fastsimcoal such as a .par file (contains the parameters for the evolutionary scenarious that should be simulated).
+For details see the fastsimcoal manual http://cmpg.unibe.ch/software/fastsimcoal2/ 

 In this walkthrough we use the following par file https://sourceforge.net/projects/mimicree2/files/fastsimcoal/20kb-chr1.txt/

@@ -75,7 +76,7 @@
 # haplotypes for multiple chromosomes
 In order to obtain haplotypes for multiple chromosomes we recommend to simulate the haplotypes for each chromosome seprately and concatenate the MimicrEE2 haplotypes.

-Given the two arp files 
+Given the two par files (fastimcoal paramters) 

 * https://sourceforge.net/projects/mimicree2/files/fastsimcoal/20kb-chr1.txt/download
 * https://sourceforge.net/projects/mimicree2/files/fastsimcoal/20kb-chr2.txt/download

GeneratingHaplotypesWithFastsimcoal modified by Robert Kofler

Robert Kofler — Thu, 21 Jun 2018 08:32:40 -0000

--- v10
+++ v11
@@ -12,19 +12,19 @@

 In this walkthrough we use the following par file https://sourceforge.net/projects/mimicree2/files/fastsimcoal/20kb-chr1.txt/

-Now let's run fastsimcoal
+Than we run fastsimcoal with the command:

 ~~~~~~
 fsc26 -i 20kb-chr1.txt -n 1 -q
 ~~~~~~

-We obtain an  apr-file such as the following: https://sourceforge.net/projects/mimicree2/files/fastsimcoal/20kb-chr1_1_1.arp
+We obtain an apr-file such as the following: https://sourceforge.net/projects/mimicree2/files/fastsimcoal/20kb-chr1_1_1.arp

-## convert arp files into a haplotype file for diploids
+## convert arp files into haplotype file (diploids)

-Finally we may convert the file 20kb-chr1_1_1.arp into a MimicrEE2 haplotype file; To obtain diploid haplotypes we use the following command:
+Finally we may convert this file (20kb-chr1_1_1.arp) into a MimicrEE2 haplotype file; To obtain diploid haplotypes we use the following command:

 ~~~~~
 java -jar mim2.jar arp2mimhap --chrname 2L --input 20kb-chr1_1_1.arp --output chr2L.mimhap
@@ -47,9 +47,9 @@
 2L 1515    T   T/C TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TC TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TC TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TC TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TC TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TC TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TC TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TC TT TT TT TT TT TT TC TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT
 ~~~~~~

-## convert arp files into a haplotype file for haploids
+## convert arp files into a haplotype file (haploids)

-To generate the arp file into a haplotype file for haploids the following command may be used
+To convert the arp file into a haplotype file for haploids the following command may be used

 ~~~~~~
 java -jar mim2.jar arp2mimhap --chrname 2L --input 20kb-chr1_1_1.arp --output chr2L-haploid.mimhap --haploid

GeneratingHaplotypesWithFastsimcoal modified by Robert Kofler

Robert Kofler — Tue, 12 Jun 2018 16:35:47 -0000

--- v9
+++ v10
@@ -100,7 +100,7 @@
 gzip -cd chr2L.mimhap.gz chr3R.mimhap.gz| gzip -c > combined2L_3R.mimhap.gz
 ~~~~~

-here is the resulting file
+which yields the following file https://sourceforge.net/projects/mimicree2/files/fastsimcoal/combined2L_3R.mimhap.gz/download

GeneratingHaplotypesWithFastsimcoal modified by Robert Kofler

Robert Kofler — Tue, 12 Jun 2018 16:33:57 -0000

--- v8
+++ v9
@@ -83,5 +83,25 @@
 We run fastsimcoal twice

 ~~~~~
+fsc26 -i walkthrough/20kb-chr1.txt -n 1 -q
+fsc26 -i walkthrough/20kb-chr2.txt -n 1 -q
 ~~~~~

+Than convert both chromosomes  independently with MimicrEE2
+
+~~~~~~
+java -jar mim2.jar arp2mimhap --chrname 2L --input 20kb-chr1_1_1.arp --output chr2L.mimhap
+java -jar mim2.jar arp2mimhap --chrname 3R --input 20kb-chr1_1_1.arp --output chr3R.mimhap
+~~~~~~
+
+And finally simply concatenate the results
+
+~~~~~
+gzip -cd chr2L.mimhap.gz chr3R.mimhap.gz| gzip -c > combined2L_3R.mimhap.gz
+~~~~~
+
+here is the resulting file
+
+
+
+

GeneratingHaplotypesWithFastsimcoal modified by Robert Kofler

Robert Kofler — Tue, 12 Jun 2018 16:30:33 -0000

--- v7
+++ v8
@@ -55,7 +55,7 @@
 java -jar mim2.jar arp2mimhap --chrname 2L --input 20kb-chr1_1_1.arp --output chr2L-haploid.mimhap --haploid
 ~~~~~~

-This gives the following output
+This gives the following output https://sourceforge.net/projects/mimicree2/files/fastsimcoal/chr2L-haploid.mimhap.gz/download

 And an example of the first ten lines

@@ -72,5 +72,16 @@
 2L 1515    T   T/C TT T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
 ~~~~~~

+# haplotypes for multiple chromosomes
+In order to obtain haplotypes for multiple chromosomes we recommend to simulate the haplotypes for each chromosome seprately and concatenate the MimicrEE2 haplotypes.

+Given the two arp files 

+* https://sourceforge.net/projects/mimicree2/files/fastsimcoal/20kb-chr1.txt/download
+* https://sourceforge.net/projects/mimicree2/files/fastsimcoal/20kb-chr2.txt/download
+
+We run fastsimcoal twice
+
+~~~~~
+~~~~~
+

GeneratingHaplotypesWithFastsimcoal modified by Robert Kofler

Robert Kofler — Tue, 12 Jun 2018 16:27:01 -0000

--- v6
+++ v7
@@ -47,6 +47,30 @@
 2L 1515    T   T/C TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TC TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TC TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TC TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TC TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TC TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TC TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TC TT TT TT TT TT TT TC TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT
 ~~~~~~

+## convert arp files into a haplotype file for haploids
+
+To generate the arp file into a haplotype file for haploids the following command may be used
+
+~~~~~~
+java -jar mim2.jar arp2mimhap --chrname 2L --input 20kb-chr1_1_1.arp --output chr2L-haploid.mimhap --haploid
+~~~~~~
+
+This gives the following output
+
+And an example of the first ten lines
+
+~~~~~~
+2L 174 A   A/T AA A A A A A A T A A A A T A A T A T A A A A A A T A T A A A T A A A A A T A A A A A A A T T A T T A A A A A A A A T A A A T A A T A A A A A A A T A A A A A T T A T A A T A A A A A A A A A T A A A A A T A A A A T A A A T T A A A A A A A A T T A A A A A A A A A A T A A A A T A A A T A A A A T T A A A T T A A A A A A A A A A A A A T A T T A A A T A A T A A A A A A A A A T A A A T T A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A T T A A T A A A A A A T A A A A A A A A T A A A A A A A A A A A A A A A A A A T A A A A A A A T A A A A A A A A A A A A A A A T T A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A A T A T A T A A A A A T T A A A A A A A T A A A A A A A A A A A A T A A A A A T A A A A A A A A A A T A A A A A A A A A A A T A A T A A A A A T A A A A A A T A A A A A A T A T A A A A A A A A A A A T A T A A A A T A A T A A A T A A A T A A A A A T T A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A T A A T A A A A A A A A T A A A A A A A A A A A A A A A A A A A A T A A A A A A A A T A A A A A A A A T A A A T A T A T A A A A A A A A A A A T A A A A A A A T A A A A T A A A A A A A A A T A A T T A A A A A A T T A A A A A A A A A A T A A A A A A A A A A A A T A T T T A T A A A A A A T T T A T A A A A A A T T A A A A T A A A A A A A A A A A A A A A A A T A A A A T A A T A A A A A A T A A A T A A A A T T T A A A A T A A A A A A T A A A A A A A A A A A A A A A A T A T A A A T A T A A T T A A A A A A A A A A T T A A T A A T A A T A A A A T T T A A T A A A A A A T A A A T A T A A A A A A A A A T T T A A A T A T A A A A A T A T A A A A T A A A A T T A T T T T T A A A A T T A A T T A A A A A A A A A A A T A A T A A A A A A A A A A A A A A A A A A A T A A A A A A A A T A T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A T A A A A A A A A A A A A A T T A A T A T A A A A A A A A A A A A A A A A A A A A A A A T A A T A A A T A A T T A A A A A A A T A A A T A A A A T A A A A A A A T T
+2L 685 G   G/C GG G G G G G G G G G G G G C G G C G G G C G G G G G G G G G G G G C G C G G G G G C G G G G G G G G G C C G C G C G G C G G C G G G G G G G G G G G G C G C G G G G C G G C C G G C G C G C G C C C G C G G G G G G C G G G G C G G G C G G C G G C C G C G G G G C G G G G G G G G C C G G G G G G G C G G G G C G C G C C G G C G G G G G G G G G G C G C C G G C C G G G G G C G G G G G G G G C G C G G G G G G G G G G C G G C G C G C G C C C G G C C C C C G C C G G C G G G C C C G C G C C G G C G G C G C C C G C G G C G G C G G C G G G C G C C G C G C G G G C G C G C G C G G G G G G G G G G G C G C C C G G G G G G G G C G G G G C G G G G G G G G G G G G C G G G G G G C C G G G G G C G G G G G C G G C C C C G G C G G G C G G C C C C G G C G C G C G G G C G C G G G C C G G G G C G G C C G C G G G G G G G C G C C C G G C C G G G G G G G C C G G C G G G G G C C G C C C G G G G C G G G G G C G G G G G G G C G G G G G G G G G G G G G G G G G G G G C G G G C G G G C C C G C C G C G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G C C G G G G G C G G G G G G G G G G G C C C G G C G G C G G G G G G C G G G G C G G G G C C G G G G G C G G G G G C C G G C G G G G G G C G C G C G C G G G G G G G G C G G G G G G G G G C G G G G G G G G G G G C G C G C G G C G G G C G G G G C G C G G G C G C C G C G G G G G G G G G G G C G G C C C G C C C G C G G G G G C G G G G G G G G C G G G G G C C G G C C C G G G C C G C G C C G G G G G G G G G G G C G G G G G C G G G G C G C G G G G G G G G G G G C G C C G G C G G G G C G G C G G C G G G G G G G G C G G G C G G C G G G G G G C G G C G C G G G G G G G G C G G G C G G G G C C G G G G G G G G C C C C G G G G G G G G G G G G G G G G G G G G C C G G G C G G G G G C G G G C C G G G G C G G G G G G G C G C G G G G G G G C G G G G G G G G G C G C G G C C G G G G G C C G C C G G G G G G G G G G G G G C C G G C C G G G G G G G C G G G G G G G C G G C G G G C G G G C G G G G C G G G G G G G G G G G G G C G G G G G G C G G G G C C C G G C C G G G G G G
+2L 692 A   A/C AA C C A C A C A C A C C A C C A C A C A C A A A A C A C A A A C A C A C A C A A C C A C A A C A A A A C C C C C C A A C A A C C A C C C C A A A A A C C A C A A A A C C A C C A C C A C A C A C C C A C A A C A A A C C A A A C C C A C A A C A A C C C C C A A A C A A C A C A A A C C A C C A A A A C A C A A C A C C C C C A C A A A A A C A A A A C A C C A C C C A C A C C C A A C A A A C C C A C A C A C A A A C A A C A C C A C A C C C C C A A C C C C C A C C A A C A A A C C C C C A C C C C C A C C A C C C A C A A C C A C C C C C A A C A C C A C C C A A C C C C C C A C A C C A A A A A A C A C A C C C A A C A A C A C C C A A A C A C A C C C A A C C A C C C A C A A C C C A A A A A C A C A C C C A A C C C C A A C A A A C A A C C C C A C C A C C C A A A C A C A C A C C A C A A C C C C C C C C C A A A C A C C C C C A C C C A A C A A C C C C A A C A A A A A C C C C C C C A C A C A A A A A C A A C A A A A C A A C C A C A A C C A C C A A A A A A C C A C A C A A A C C C A C C C C C A A A A C C C C C C A C A A A A A C C A A C A A C C A A C C C C A A A C C C C C A C A A A C C C C C C A A C A C C A A C C A A C C A C A C A A C A C C A C C A C C A C A A C C C C A C A A C A A A C A C A C C C A A C A A A A C C A C A A C C C C A C C A A C A A C C A A A C A C C C C A C A A A C A C A C C A C A A A C A C C A C C A A A A A C A A C C C A A C C C A C C C C C C A A A C C C C A A A A A C C A C C A A C C A C C C C A A A C C A C A C C A A A A A C A C A A C C A C C A A C A A C A C A C C C A C A A C A A C C C C C C A C C A A A A C A C C A A C A C A A C A A A C C A A C A C C A A C C A A C A C C C C C A A A C A A A C C A A C A C C A C C A A A A A C A A C C C C A A C A A A A A A A A A A A C A A A C A C C C C A C C A A A A C A C C C C A C C A C C C C A A A A C C C A A A A A C C C A A A A A C C A C C C C C C C C C A A A C C C A C C A A A C C A C A A C C C A C C C C C C C A A A A A A C A A A C A C C C C A C A C A C A A A C C A C C C A A C A C C A A C A A A A C A C A A C A C C C A A C C C A A C C C A A C A A
+2L 729 C   C/T CC C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
+2L 833 A   A/C AA C C A C A C A C A C C A A C A A A C A A A A A A C A C A A A C A A A A A C A A C A A A A A C A A A A A A A A A A A A A A A A C A C C C C A A A A A A A A A A A A A A C A A A A C A A A A A A A A A A A A A C A A A A C A A A A A C A A A A A A A A A C A C A A A A A A C A C A A A A A A C C A A A A A A C A A A A A C A A C A A A A A A A C A A A A A A A A A C A A A C A C C A A A C A A A C C A A A A C A C A A A C A A A A C A A A A A C A A A A A A A A A A A A A A A A A A A A A A C A A A A C C A A C A A A A A A A A A A C A A C C A C A A A A A A A A C A A A C A C A C A A A A C C A A A A A A C A A A A A A A A A A A C A C A C A A A A A C A C C C A A C C A A A C A A A A C A A A A A A A A A C A C C A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A C A A A A C A A A C C A A C A C C A A A C A A C A A A A A A A A A C A A C A A A A A A A A A A A A A C A A A C A C A A A A A A A A A A A A A A A A A A C C A A A A C C A C A A A A A A A C A A C A A A A A A A A A A A A A C A A A A C C C A C C A C A A A A A A C A A C A A C C A A C A A A A A A C A C C C A C A A A C C C A A A A A A A C A A A C C A A A C A C A A A A C A A A A C C A A A A A A A C A A C A A A A C A A A A A A A A C A A A C A A A A C A A C A A C C C C A A C A A C A A C C A A A A A A C A C A A A A A A A C A C A A A A A A A A A A A A C A A A A A C A A C A A A A A A A A A A A A A C A A A C A C C A A A A A C A A C C A A A A A C A A A A A A A A A A A A A A A A A A C A C A A C A A C C A A A A A A A A A A C C A C A A C A A C A A C A A A C A A A A A A A C A A A A A A A A C A A A A C A A A A C A A A C C A A A A C A C A A A A A C A A A A C A A A A C A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A C A A A C A A A C C A A C A A A A A A C C A A A C C A A C C C A A A A A C A A A A A A C C A A A A A A C C A C A C A C C A A C A A A C A A A A A A A A C C A C A A C C C A A A C A A A C A A A A A A A A A A A A A C A C A A A C A A A A A A C A C C A A A C A C C A A C A A A A A A C A A C A A C C A A A A A A A A A C A A C A A
+2L 1023    A   A/C AA A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A C A A A A A A A A A A C A A A A A A A A A A A C A A A A A A A A A C A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A C A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A C A A A A A A A A A A A A A C A A A A C A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A C A C A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A C C A A A A A C A A A A A A C A A A A A A A A A A A A A A A A A A C A A A A A C A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A C A A A C A A A A A A C A A A A A A A A A A A A A A A A C A A A A C A C A A A A A A A A A A A A C A A A A A C A C A A C C A A A A C A A A C C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A C A A A C A A A A A A A A A A A A A A
+2L 1117    A   A/T AA A A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
+2L 1400    T   T/G TT G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
+2L 1444    A   A/T AA A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
+2L 1515    T   T/C TT T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
+~~~~~~

GeneratingHaplotypesWithFastsimcoal modified by Robert Kofler

Robert Kofler — Tue, 12 Jun 2018 16:23:01 -0000

--- v5
+++ v6
@@ -35,16 +35,16 @@
 An example of the first ten lines:

 ~~~~~~
-2L 174 A   A/T TT TT TT TA TT TT AT TA TA TT TT TT AT AT TT AT TT TT AT TT TT TT AA TA AT TT TT TT TA TT TA TT AT TT TT TT AT TT TT AA TA TT AT TT TT TT TT AT TT TT AT TT TA TT TA AT TT TT TT TA AT TT TT TT TT TA TT TT AT TT AT TT TA AT TT AA TT TT TT TT TT TT TA TA AT TT AT TA TT TT TT TT TA TT TA AT TT TT TT TT TT TT TT TT TT TT TT TT TT AT TT TT TT TT AA TT AT TT TT TA TT TT TT TT AT TT TT TT TT TT TT TT TT TA TT TT TT TA TT TT TT TT TT TT TT TA AT AT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TA TT TT TA TA TA TT TT TA AT TT TT TT AT TT TT TT TT TT TA TT TT TA TT TT TT TT TT AT TT TT TT TT TT AT TA TT TT TA TT TT TT AT TT TT TA TA TT TT TT TT TT TA TA TT TT AT TA TT TA TT TA TT TT TA AT TA TT TT TT TT TT TT TT TT TT TT TT TT TT TA TT TT TT TT AT TA TT TT TT TT AT TT TT TT TT TT TT TT TT TT TA TT TT TT TT AT TT TT TT TA TT TA TA TA TT TT TT TT TT TA TT TT TT TA TT TT AT TT TT TT TT AT TA AT TT TT TA AT TT TT TT TT TA TT TT TT TT TT TT AT AA AT AT TT TT TA AA TA TT TT TT AA TT TT AT TT TT TT TT TT TT TT TT AT TT TA TT AT TT TT TA TT TA TT TT AA AT TT TA TT TT TT AT TT TT TT TT TT TT TT TA TA TT TA TA TT AA TT TT TT TT TT AA TT AT TA TT AT TT TA AA TT AT TT TT TA TT TA TA TT TT TT TT TA AA TT TA TA TT TT TA TA TT TT AT TT TA AT AA AA AT TT TA AT TA AT TT TT TT TT TT AT TA TT TT TT TT TT TT TT TT TT TA TT TT TT TT AT AT TT TT TT TT TT TT TT TT TT AT TT TT TT TT AT TT TT TT TT TT TT AA TT AT AT TT TT TT TT TT TT TT TT TT TT TT AT TA TT TA TT AA TT TT TT TA TT TA TT TT AT TT TT TT AA
-2L 685 G   G/C CC CC CC CC CC CC CG CC GC CC GC CC CC CC CC CC CG CG CC CC CG CC CC CC CC CG GC GC GC CG CC GC CC CC CC CC CC CG CG CC CC GC CG GC CG CG CG CG GG CG CC CC CC GC CC CG CC CG CC GC CG GC GC CC CG CC CC CC CC GG CC CC CC CG CC CC GC GC GG CC GC CC CC CC CC CG CG GC CG GC CC CC GC CC CC CC CG CG CC CC CC CC CC GC CG CG CG CG GG CC GG GG GC GG CC GC CC GG GC GC GG CC GC CG CG GG CG CC GC CG CC GC CC GC GG CG CG CC CG CG CG CG CC CC CC CC CC CG CG GG CC CC CC CC GC CC CG CC CC CC CC CC CC GC CC CC CG GC CC CC GC CC CC GC CG GG GC CG CC CG CC GG GG CC GC GC GC CC GC GC CC GG CC CC GC CG GC GC CC CC CC GC GG GC CG GC CC CC CC GG CC GC CC CC GG CG GG CC CC GC CC CC GC CC CC CC GC CC CC CC CC CC CC CC CC CC CG CC CG CC CG GG CG GC GC CC CC CC CC CC CC CC CC CG CC CC CC CC CC CG GC CC CC GC CC CC CC CC CC GG GC CG CC GC CC CC CG CC CC GC CC CG GC CC CC GC CC CC GG CC GC CC CC CG CG CG CG CC CC CC CC GC CC CC CC CC GC CC CC CC CC CC GC GC GC CG CC CG CC CC GC GC CC GC GG CG CC CC CC CC CC CG CC GG GC GG GC GC CC CC GC CC CC CC CG CC CC CG GC CG GG CC CG GC GC GG CC CC CC CC CC CG CC CC CG CC CC GC GC CC CC CC CC CC GC GG CC GC CC CG CC GC CG CC CC CC CC GC CC GC CG CC CC CC GC CG CG CC CC CC CC GC CC GC CC CG GC CC CC CC CG GG GC CC CC CC CC CC CC CC CC CC CG GC CC GC CC CC GC CC GG CC CC GC CC CC CC GC GC CC CC CC GC CC CC CC CC GC GC CG GC CC CC GG CG GC CC CC CC CC CC CC GG CC GG CC CC CC CG CC CC CC CG CC GC CC GC CC GC CC CG CC CC CC CC CC CC CG CC CC CC GC CC CG GG CC GG CC CC CC
-2L 692 A   A/C CA AC AC AC AC AA CA AC AC AC AC CC CA CA CC CA CA CA CA CC AA CA CC AC CC CA AA AA AC CA CC AA CA AA AC CC CC AA CA CC CC AA CA AC AA CA CA CA AA CA CC AC CC AA CC CA AA CA CC AC CA AA AA CC CA CC AC AC CC AA CA AC CC CA CA CC AC AA AA AC AC CC CC AC CC CA CA AC AA AC AC AA AC CA CC CA AA CA CA CA CC CA CC AC AA CA CA AA AA CC AA AA AC AA CC AC CC AA AA AC AA AA AC AA CA AA CA CC AA CA AA AA CC AC AA CA AA CC AA AA AA CA CA AC CC CC CA CA CA AA CC AC CA CA AA CC CA CA CA AA CC AA CA AA CA CC AA AC CC CC AC AC AA AC CA AA AC CA CC CA CC AA AA CA AC AA AC CC AC AC AC AA CA CC AA AA AA AA AC CC AC AA AA AC AA AC CA CC AA AA CC AC CC CC AA AA AA AC AC AC CC CC AC CA CC CC AC CA AC AC CA AC AA CC CC CC AA CA CA CC CA AA CA AA AA CC CC AA AA AA CA CC CC CA AC CA CC AA CC AA AA CC CA AA AA CA CC CA AA AA AC CA CA AC CA AC CA AC AC AC CA CA AC AA CA AC AC CA AA AC AC CA CC CA CA CA AA CC AC CC CA AC AC CA AA AC AA CC AC CA AC CC AC AA AA CA CC CA CA CA AC AC CC AC AA CA AC CC CC AC CA AA CC AA AC AA AA AA CC CA AA AC CC CC AA CA AC CA AC AA AA CC CA AC AC AA CC CC CA CA CC AA CA AC CA CC AC AC AA AC AC CA CC AA AA AA CA AC CC CA CA AC CA CA CC AC CC AA CC AC AA CC AA CC AC AA AA AC CC AC CC AA CC AC AA CA AC CC CC AC CA AA AC CA CC CC CC CC CC CA CC CA CA AA AC AA CC CC AC AA AA CA AC AA AA CC CC AA AC CC CC AA AC CC CC AA CA AA AA AA AA CC CA AA CA AC CC AA CA CC AA AC AA AA AA AC CC CC CA CC CA CA AA AC AC AC AC CC AA CA AA CC AC AA CC AC CC CA CA CC AC AA AC CA AA CC AA AC CA CC
-2L 729 C   C/T TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT CT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TC TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT
-2L 833 A   A/C CA AC AC AC AC AA CC AC CC AC CC CC CA CA CC CA CC CC CA CC AC CC CC AC CC CC CC CC CC CC CC CA CA AA AC CC CC CC CC CC CC CA CC CC AC CC CC CC CC CC CC AC CC CA CC CC CA CC CC CC CC CA CA CC CC CC AC AC CC CC CA AC CC CC CA CC CC CA CC AC CC CC CC AC CC CC CC CC AC CC AC AA CC CA CC CA AC CC CA CA CC CA CC CC AC CC CC AC CC CC CC CC CC CC CC CC CC CC CA CC CC AA CC AC CC CC CC CC CA CC AA CA CC CC CC CC AC CC AC AC AC CC CA AC CC CC CA CC CC CC CC CC CA CA CA CC CC CA CA AA CC AA CC CA CC CC AC CC CC CC CC AC AA CC CC CC CC CC CC CC CC CC CC CA CC CC CC CC CC CC AC CC CA CC CA AC CA CA AC CC AC CA CC CC CC CC CA CC AC CC CC CC CC CC CC AC CC AC AC CC CC CC CC CC CC CC CC CA AC CC CA AC AC CC CC CC AC CA CC CC CC CC CC CC CA CC CC AA AC AA CA CC CC CC AC CA CC AA CC AC CC CC CA CA AA CA CC CA AA CC CC CC CA CC CA AC CC AC AC CC CA CC CC AA CC CC CC CA CC AC CC CA CC CC CC CC AC CC AC CC CA CC AC CA AA AC CA CC AC CA AC CC CC CA CA CC CC CC CA CA CC CC CC CC CC CC AC CC CC AC CA CC CC CC CC CC CC CA CC CA CA AC CC CC AC CA AC CC CC AC CC CC CC CC CC CC CC CC CA CA CC AC CA AC CC CC CC CC CA AC AC CA CC AC CA CC CA CC CC CC CA CC CC CC CC AC CC CA CC CC AC CC AA CC CC AC AC CC CC AC CC CA CC CC AC CC CC CC CC CC CC CC CC CA CC CC CC CC CC CA CC CA CC CA AC CA CC CC CC AA CC CA AC CA AA CC CC CA CC CC CC AA CC CC CC AA CA CA CA AC CA CC CA CC CC CC CC AA CA CC AA AC CC AC CC AC CC CC CC CC CC CC AC AC CC AC CC CC CA CA AC CC AC AA CC AC CC CC CA CC AC CA AC CC CC CC CC AC CA CC
-2L 1023    A   A/C CC CC CC CA CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC AC CC CC CC CC CC CC CC CA CC CC CC CC CC AC CC CC CC CC CC AC CC CC CC CC AC CC CC CC CC CC CC CC AC CC CC CC CC CC CC CC CC CC CC CC CC CC CC AC CC CC CC CC CC CC CC CC CC CC CC CC CC AC CC AC CC CC CC CC CC CC CC CC AC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC AC CC CC CC CC CC CC CC CC CC CC CC CC CA CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CA CC CC CC CA CC CC CC CC CC CC CC CC CC CC CC CC CC CC CA CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CA CA CC CC CC CC CC CC CA CC CC AC CC CC CA CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC AC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC AC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CA CC CC CC CC CC CA CC CC CC CC CC CC CC CC CC CC CC CC CC CA CA CC CC CC AC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC AC CC CC CC CC CC CC CC AA CC CC CA CC CC CC AC CC CC CC CC CC CC CC CC CA CC CC CA CC CC CC CC CC CC CC CC CC AC CC CC CC CC CC AC CC AC CC CC CA CC CC CC CC CC CC CC CC AC CC CA CA CC CC CC CC CC CC AC CC CC AC AC CA AC CC CA CC CA AC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC AC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CA CC CC CC CC CC CA CC CA CC CC CC CC CC CC CC
-2L 1117    A   A/T TT TT TT TT TT TT TT TT TT TT TT TT AT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT
-2L 1400    T   T/G GT GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG TG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG TG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GT GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG TG GG GG TG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GT GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG GG
-2L 1444    A   A/T TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TA TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TA TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT AT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TA TT TT TT TT TT TT TT TT TA TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT
-2L 1515    T   T/C CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CT CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CT CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CT CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CT CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CT CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CT CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CT CC CC CC CC CC CC CT CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC
+2L 174 A   A/T AA AA AA AT AA AA TA AT AT AA AA AA TA TA AA TA AA AA TA AA AA AA TT AT TA AA AA AA AT AA AT AA TA AA AA AA TA AA AA TT AT AA TA AA AA AA AA TA AA AA TA AA AT AA AT TA AA AA AA AT TA AA AA AA AA AT AA AA TA AA TA AA AT TA AA TT AA AA AA AA AA AA AT AT TA AA TA AT AA AA AA AA AT AA AT TA AA AA AA AA AA AA AA AA AA AA AA AA AA TA AA AA AA AA TT AA TA AA AA AT AA AA AA AA TA AA AA AA AA AA AA AA AA AT AA AA AA AT AA AA AA AA AA AA AA AT TA TA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AT AA AA AT AT AT AA AA AT TA AA AA AA TA AA AA AA AA AA AT AA AA AT AA AA AA AA AA TA AA AA AA AA AA TA AT AA AA AT AA AA AA TA AA AA AT AT AA AA AA AA AA AT AT AA AA TA AT AA AT AA AT AA AA AT TA AT AA AA AA AA AA AA AA AA AA AA AA AA AA AT AA AA AA AA TA AT AA AA AA AA TA AA AA AA AA AA AA AA AA AA AT AA AA AA AA TA AA AA AA AT AA AT AT AT AA AA AA AA AA AT AA AA AA AT AA AA TA AA AA AA AA TA AT TA AA AA AT TA AA AA AA AA AT AA AA AA AA AA AA TA TT TA TA AA AA AT TT AT AA AA AA TT AA AA TA AA AA AA AA AA AA AA AA TA AA AT AA TA AA AA AT AA AT AA AA TT TA AA AT AA AA AA TA AA AA AA AA AA AA AA AT AT AA AT AT AA TT AA AA AA AA AA TT AA TA AT AA TA AA AT TT AA TA AA AA AT AA AT AT AA AA AA AA AT TT AA AT AT AA AA AT AT AA AA TA AA AT TA TT TT TA AA AT TA AT TA AA AA AA AA AA TA AT AA AA AA AA AA AA AA AA AA AT AA AA AA AA TA TA AA AA AA AA AA AA AA AA AA TA AA AA AA AA TA AA AA AA AA AA AA TT AA TA TA AA AA AA AA AA AA AA AA AA AA AA TA AT AA AT AA TT AA AA AA AT AA AT AA AA TA AA AA AA TT
+2L 685 G   G/C GG GG GG GG GG GG GC GG CG GG CG GG GG GG GG GG GC GC GG GG GC GG GG GG GG GC CG CG CG GC GG CG GG GG GG GG GG GC GC GG GG CG GC CG GC GC GC GC CC GC GG GG GG CG GG GC GG GC GG CG GC CG CG GG GC GG GG GG GG CC GG GG GG GC GG GG CG CG CC GG CG GG GG GG GG GC GC CG GC CG GG GG CG GG GG GG GC GC GG GG GG GG GG CG GC GC GC GC CC GG CC CC CG CC GG CG GG CC CG CG CC GG CG GC GC CC GC GG CG GC GG CG GG CG CC GC GC GG GC GC GC GC GG GG GG GG GG GC GC CC GG GG GG GG CG GG GC GG GG GG GG GG GG CG GG GG GC CG GG GG CG GG GG CG GC CC CG GC GG GC GG CC CC GG CG CG CG GG CG CG GG CC GG GG CG GC CG CG GG GG GG CG CC CG GC CG GG GG GG CC GG CG GG GG CC GC CC GG GG CG GG GG CG GG GG GG CG GG GG GG GG GG GG GG GG GG GC GG GC GG GC CC GC CG CG GG GG GG GG GG GG GG GG GC GG GG GG GG GG GC CG GG GG CG GG GG GG GG GG CC CG GC GG CG GG GG GC GG GG CG GG GC CG GG GG CG GG GG CC GG CG GG GG GC GC GC GC GG GG GG GG CG GG GG GG GG CG GG GG GG GG GG CG CG CG GC GG GC GG GG CG CG GG CG CC GC GG GG GG GG GG GC GG CC CG CC CG CG GG GG CG GG GG GG GC GG GG GC CG GC CC GG GC CG CG CC GG GG GG GG GG GC GG GG GC GG GG CG CG GG GG GG GG GG CG CC GG CG GG GC GG CG GC GG GG GG GG CG GG CG GC GG GG GG CG GC GC GG GG GG GG CG GG CG GG GC CG GG GG GG GC CC CG GG GG GG GG GG GG GG GG GG GC CG GG CG GG GG CG GG CC GG GG CG GG GG GG CG CG GG GG GG CG GG GG GG GG CG CG GC CG GG GG CC GC CG GG GG GG GG GG GG CC GG CC GG GG GG GC GG GG GG GC GG CG GG CG GG CG GG GC GG GG GG GG GG GG GC GG GG GG CG GG GC CC GG CC GG GG GG
+2L 692 A   A/C AC CA CA CA CA CC AC CA CA CA CA AA AC AC AA AC AC AC AC AA CC AC AA CA AA AC CC CC CA AC AA CC AC CC CA AA AA CC AC AA AA CC AC CA CC AC AC AC CC AC AA CA AA CC AA AC CC AC AA CA AC CC CC AA AC AA CA CA AA CC AC CA AA AC AC AA CA CC CC CA CA AA AA CA AA AC AC CA CC CA CA CC CA AC AA AC CC AC AC AC AA AC AA CA CC AC AC CC CC AA CC CC CA CC AA CA AA CC CC CA CC CC CA CC AC CC AC AA CC AC CC CC AA CA CC AC CC AA CC CC CC AC AC CA AA AA AC AC AC CC AA CA AC AC CC AA AC AC AC CC AA CC AC CC AC AA CC CA AA AA CA CA CC CA AC CC CA AC AA AC AA CC CC AC CA CC CA AA CA CA CA CC AC AA CC CC CC CC CA AA CA CC CC CA CC CA AC AA CC CC AA CA AA AA CC CC CC CA CA CA AA AA CA AC AA AA CA AC CA CA AC CA CC AA AA AA CC AC AC AA AC CC AC CC CC AA AA CC CC CC AC AA AA AC CA AC AA CC AA CC CC AA AC CC CC AC AA AC CC CC CA AC AC CA AC CA AC CA CA CA AC AC CA CC AC CA CA AC CC CA CA AC AA AC AC AC CC AA CA AA AC CA CA AC CC CA CC AA CA AC CA AA CA CC CC AC AA AC AC AC CA CA AA CA CC AC CA AA AA CA AC CC AA CC CA CC CC CC AA AC CC CA AA AA CC AC CA AC CA CC CC AA AC CA CA CC AA AA AC AC AA CC AC CA AC AA CA CA CC CA CA AC AA CC CC CC AC CA AA AC AC CA AC AC AA CA AA CC AA CA CC AA CC AA CA CC CC CA AA CA AA CC AA CA CC AC CA AA AA CA AC CC CA AC AA AA AA AA AA AC AA AC AC CC CA CC AA AA CA CC CC AC CA CC CC AA AA CC CA AA AA CC CA AA AA CC AC CC CC CC CC AA AC CC AC CA AA CC AC AA CC CA CC CC CC CA AA AA AC AA AC AC CC CA CA CA CA AA CC AC CC AA CA CC AA CA AA AC AC AA CA CC CA AC CC AA CC CA AC AA
+2L 729 C   C/T CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC TC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CT CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC CC
+2L 833 A   A/C AC CA CA CA CA CC AA CA AA CA AA AA AC AC AA AC AA AA AC AA CA AA AA CA AA AA AA AA AA AA AA AC AC CC CA AA AA AA AA AA AA AC AA AA CA AA AA AA AA AA AA CA AA AC AA AA AC AA AA AA AA AC AC AA AA AA CA CA AA AA AC CA AA AA AC AA AA AC AA CA AA AA AA CA AA AA AA AA CA AA CA CC AA AC AA AC CA AA AC AC AA AC AA AA CA AA AA CA AA AA AA AA AA AA AA AA AA AA AC AA AA CC AA CA AA AA AA AA AC AA CC AC AA AA AA AA CA AA CA CA CA AA AC CA AA AA AC AA AA AA AA AA AC AC AC AA AA AC AC CC AA CC AA AC AA AA CA AA AA AA AA CA CC AA AA AA AA AA AA AA AA AA AA AC AA AA AA AA AA AA CA AA AC AA AC CA AC AC CA AA CA AC AA AA AA AA AC AA CA AA AA AA AA AA AA CA AA CA CA AA AA AA AA AA AA AA AA AC CA AA AC CA CA AA AA AA CA AC AA AA AA AA AA AA AC AA AA CC CA CC AC AA AA AA CA AC AA CC AA CA AA AA AC AC CC AC AA AC CC AA AA AA AC AA AC CA AA CA CA AA AC AA AA CC AA AA AA AC AA CA AA AC AA AA AA AA CA AA CA AA AC AA CA AC CC CA AC AA CA AC CA AA AA AC AC AA AA AA AC AC AA AA AA AA AA AA CA AA AA CA AC AA AA AA AA AA AA AC AA AC AC CA AA AA CA AC CA AA AA CA AA AA AA AA AA AA AA AA AC AC AA CA AC CA AA AA AA AA AC CA CA AC AA CA AC AA AC AA AA AA AC AA AA AA AA CA AA AC AA AA CA AA CC AA AA CA CA AA AA CA AA AC AA AA CA AA AA AA AA AA AA AA AA AC AA AA AA AA AA AC AA AC AA AC CA AC AA AA AA CC AA AC CA AC CC AA AA AC AA AA AA CC AA AA AA CC AC AC AC CA AC AA AC AA AA AA AA CC AC AA CC CA AA CA AA CA AA AA AA AA AA AA CA CA AA CA AA AA AC AC CA AA CA CC AA CA AA AA AC AA CA AC CA AA AA AA AA CA AC AA
+2L 1023    A   A/C AA AA AA AC AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA CA AA AA AA AA AA AA AA AC AA AA AA AA AA CA AA AA AA AA AA CA AA AA AA AA CA AA AA AA AA AA AA AA CA AA AA AA AA AA AA AA AA AA AA AA AA AA AA CA AA AA AA AA AA AA AA AA AA AA AA AA AA CA AA CA AA AA AA AA AA AA AA AA CA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA CA AA AA AA AA AA AA AA AA AA AA AA AA AC AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AC AA AA AA AC AA AA AA AA AA AA AA AA AA AA AA AA AA AA AC AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AC AC AA AA AA AA AA AA AC AA AA CA AA AA AC AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA CA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA CA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AC AA AA AA AA AA AC AA AA AA AA AA AA AA AA AA AA AA AA AA AC AC AA AA AA CA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA CA AA AA AA AA AA AA AA CC AA AA AC AA AA AA CA AA AA AA AA AA AA AA AA AC AA AA AC AA AA AA AA AA AA AA AA AA CA AA AA AA AA AA CA AA CA AA AA AC AA AA AA AA AA AA AA AA CA AA AC AC AA AA AA AA AA AA CA AA AA CA CA AC CA AA AC AA AC CA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA CA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AC AA AA AA AA AA AC AA AC AA AA AA AA AA AA AA
+2L 1117    A   A/T AA AA AA AA AA AA AA AA AA AA AA AA TA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA
+2L 1400    T   T/G TG TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT GT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT GT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TG TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT GT TT TT GT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TG TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT
+2L 1444    A   A/T AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AT AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AT AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA TA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AT AA AA AA AA AA AA AA AA AT AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA
+2L 1515    T   T/C TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TC TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TC TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TC TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TC TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TC TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TC TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TC TT TT TT TT TT TT TC TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT TT
 ~~~~~~