<?xml version="1.0" encoding="utf-8"?>
<rss version="2.0" xmlns:atom="http://www.w3.org/2005/Atom"><channel><title>Recent changes to Tools</title><link>https://sourceforge.net/p/microbialmodelingexchange/wiki/Tools/</link><description>Recent changes to Tools</description><atom:link href="https://sourceforge.net/p/microbialmodelingexchange/wiki/Tools/feed" rel="self"/><language>en</language><lastBuildDate>Fri, 12 Nov 2021 11:40:08 -0000</lastBuildDate><atom:link href="https://sourceforge.net/p/microbialmodelingexchange/wiki/Tools/feed" rel="self" type="application/rss+xml"/><item><title>Tools modified by Alberto Garre</title><link>https://sourceforge.net/p/microbialmodelingexchange/wiki/Tools/</link><description>&lt;div class="markdown_content"&gt;&lt;pre&gt;--- v23
+++ v24
@@ -9,7 +9,10 @@
 +   [GInaFiT](/p/microbialmodelingexchange/wiki/ginafit)
 +   [IPMP](http://www.ars.usda.gov/Services/Docs.htm?docid=23355)
 +   [nlsMicrobio (R package)](http://cran.r-project.org/web/packages/nlsMicrobio/index.html)
-+   [bioinactivation (R package)](https://cran.r-project.org/web/packages/bioinactivation/vignettes/inactivation.html)
++   [bioinactivation (R package)](https://CRAN.R-project.org/package=bioinactivation)
++   [bioinactivation (web application)](https://foodlab-upct.shinyapps.io/bioinactivation4)
++   [biogrowth (R package)](https://CRAN.R-project.org/package=biogrowth)
++   [biogrowth (web application)](https://foodmicrowur.shinyapps.io/biogrowth)
 +   [OptiPa](/p/microbialmodelingexchange/wiki/optipa)
 +   [PMM-Lab](/p/microbialmodelingexchange/wiki/pmmlab)

&lt;/pre&gt;
&lt;/div&gt;</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Alberto Garre</dc:creator><pubDate>Fri, 12 Nov 2021 11:40:08 -0000</pubDate><guid>https://sourceforge.net3bfecaa9ada87c4be7313757269d4e51f3c374ba</guid></item><item><title>Tools modified by Carolina</title><link>https://sourceforge.net/p/microbialmodelingexchange/wiki/Tools/</link><description>&lt;div class="markdown_content"&gt;&lt;pre&gt;--- v22
+++ v23
@@ -18,7 +18,6 @@
 +   [openFSMR - a community driven search engine for predictive microbial models](https://sites.google.com/site/openfsmr/)

 +   [Baseline Software Tool](/p/microbialmodelingexchange/wiki/baseline)
-+   [Bioinactivation core](https://cran.r-project.org/web/packages/bioinactivation/vignettes/inactivation.html)
 +   [Bioinactivation SE](https://opada-upct.shinyapps.io/bioinactivation_SE/) 
 +   [ComBase Predictor](/p/microbialmodelingexchange/wiki/combase)
 +   [Dairy products safety predictor](/p/microbialmodelingexchange/wiki/dpsp)
&lt;/pre&gt;
&lt;/div&gt;</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Carolina</dc:creator><pubDate>Thu, 27 Jul 2017 09:51:03 -0000</pubDate><guid>https://sourceforge.netf51c425f4010b448a179dab00c3f6700151ac10f</guid></item><item><title>Tools modified by Carolina</title><link>https://sourceforge.net/p/microbialmodelingexchange/wiki/Tools/</link><description>&lt;div class="markdown_content"&gt;&lt;pre&gt;--- v21
+++ v22
@@ -18,8 +18,8 @@
 +   [openFSMR - a community driven search engine for predictive microbial models](https://sites.google.com/site/openfsmr/)

 +   [Baseline Software Tool](/p/microbialmodelingexchange/wiki/baseline)
-+   [Bioinactivation core] (https://cran.r-project.org/web/packages/bioinactivation/vignettes/inactivation.html)
-+   [Bioinactivation SE] (https://opada-upct.shinyapps.io/bioinactivation_SE/) 
++   [Bioinactivation core](https://cran.r-project.org/web/packages/bioinactivation/vignettes/inactivation.html)
++   [Bioinactivation SE](https://opada-upct.shinyapps.io/bioinactivation_SE/) 
 +   [ComBase Predictor](/p/microbialmodelingexchange/wiki/combase)
 +   [Dairy products safety predictor](/p/microbialmodelingexchange/wiki/dpsp)
 +   [DMRI - predictive models for meat](/p/microbialmodelingexchange/wiki/pmsmp)
&lt;/pre&gt;
&lt;/div&gt;</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Carolina</dc:creator><pubDate>Thu, 27 Jul 2017 08:30:39 -0000</pubDate><guid>https://sourceforge.net4aae02ecad0455cdbb848e486d7ce0093c437253</guid></item><item><title>Tools modified by Carolina</title><link>https://sourceforge.net/p/microbialmodelingexchange/wiki/Tools/</link><description>&lt;div class="markdown_content"&gt;&lt;pre&gt;--- v20
+++ v21
@@ -18,6 +18,8 @@
 +   [openFSMR - a community driven search engine for predictive microbial models](https://sites.google.com/site/openfsmr/)

 +   [Baseline Software Tool](/p/microbialmodelingexchange/wiki/baseline)
++   [Bioinactivation core] (https://cran.r-project.org/web/packages/bioinactivation/vignettes/inactivation.html)
++   [Bioinactivation SE] (https://opada-upct.shinyapps.io/bioinactivation_SE/) 
 +   [ComBase Predictor](/p/microbialmodelingexchange/wiki/combase)
 +   [Dairy products safety predictor](/p/microbialmodelingexchange/wiki/dpsp)
 +   [DMRI - predictive models for meat](/p/microbialmodelingexchange/wiki/pmsmp)
&lt;/pre&gt;
&lt;/div&gt;</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Carolina</dc:creator><pubDate>Thu, 27 Jul 2017 08:28:51 -0000</pubDate><guid>https://sourceforge.net9602ef56524757bfe952d164348b77229b929aec</guid></item><item><title>Tools modified by Matthias Filter</title><link>https://sourceforge.net/p/microbialmodelingexchange/wiki/Tools/</link><description>&lt;div class="markdown_content"&gt;&lt;pre&gt;--- v19
+++ v20
@@ -9,6 +9,7 @@
 +   [GInaFiT](/p/microbialmodelingexchange/wiki/ginafit)
 +   [IPMP](http://www.ars.usda.gov/Services/Docs.htm?docid=23355)
 +   [nlsMicrobio (R package)](http://cran.r-project.org/web/packages/nlsMicrobio/index.html)
++   [bioinactivation (R package)](https://cran.r-project.org/web/packages/bioinactivation/vignettes/inactivation.html)
 +   [OptiPa](/p/microbialmodelingexchange/wiki/optipa)
 +   [PMM-Lab](/p/microbialmodelingexchange/wiki/pmmlab)

&lt;/pre&gt;
&lt;/div&gt;</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Matthias Filter</dc:creator><pubDate>Fri, 19 Aug 2016 12:34:15 -0000</pubDate><guid>https://sourceforge.netb29ce26d0ddbf8a0610308a0dcbb2b2f79924ff7</guid></item><item><title>Tools modified by Matthias Filter</title><link>https://sourceforge.net/p/microbialmodelingexchange/wiki/Tools/</link><description>&lt;div class="markdown_content"&gt;&lt;pre&gt;--- v18
+++ v19
@@ -32,8 +32,10 @@
 +   [MLA Refrigeration Index Calculator](http://www.foodsafetycentre.com.au/refrigerationindex.php)
 +   [Process lethality determination spreadsheet](http://www.amif.org/process-lethality)
 +   [Perfringens Predictor](http://www.combase.cc/tools/)
++   [Praedicere](http://praedicere.uniud.it/)
++   [Salmonella predictions](http://www.ifr.ac.uk/safety/SalmonellaPredictions/)
 +   [Shelf Stability Predictor](http://www.meathaccp.wisc.edu/ST_calc.html)
-+   [Salmonella predictions](http://www.ifr.ac.uk/safety/SalmonellaPredictions/)
++   [SWEETSHELF](http://www.cpmf2.be/software.php)
 +   [Sym'Previus](/p/microbialmodelingexchange/wiki/symprevius)
 +   [Therm 2.0](http://www.meathaccp.wisc.edu/pathogen_modeling/therm.html)

&lt;/pre&gt;
&lt;/div&gt;</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Matthias Filter</dc:creator><pubDate>Mon, 14 Sep 2015 23:23:25 -0000</pubDate><guid>https://sourceforge.net20b55c783276ea0934a5089cafe09426d883fca4</guid></item><item><title>Tools modified by Matthias Filter</title><link>https://sourceforge.net/p/microbialmodelingexchange/wiki/Tools/</link><description>&lt;div class="markdown_content"&gt;&lt;pre&gt;--- v17
+++ v18
@@ -14,6 +14,7 @@

 **Predictive Microbiology - prediction tools:**
++   [openFSMR - a community driven search engine for predictive microbial models](https://sites.google.com/site/openfsmr/)

 +   [Baseline Software Tool](/p/microbialmodelingexchange/wiki/baseline)
 +   [ComBase Predictor](/p/microbialmodelingexchange/wiki/combase)
&lt;/pre&gt;
&lt;/div&gt;</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Matthias Filter</dc:creator><pubDate>Wed, 02 Sep 2015 10:54:21 -0000</pubDate><guid>https://sourceforge.net40b8513d715252bc6e8e08ab9f1eff1d324dfccb</guid></item><item><title>Tools modified by Matthias Filter</title><link>https://sourceforge.net/p/microbialmodelingexchange/wiki/Tools/</link><description>&lt;div class="markdown_content"&gt;&lt;pre&gt;--- v16
+++ v17
@@ -20,9 +20,9 @@
 +   [Dairy products safety predictor](/p/microbialmodelingexchange/wiki/dpsp)
 +   [DMRI - predictive models for meat](/p/microbialmodelingexchange/wiki/pmsmp)
 +   [E. coli Inactivation in Fermented Meats Model](http://www.foodsafetycentre.com.au/fermenter.php)
-+   [EcSF - E. coli SafeFerment](http://www.ifr.ac.uk/safety/EcoliSafeFerment/)
++   [EcSF - E. coli SafeFerment](http://www.ifr.ac.uk/safety/EcoliSafeFerment/Ecoli_SafeFerment_V2.xls)
 +   [Food Spoilage and Safety Predictor (FSSP)](/p/microbialmodelingexchange/wiki/fssp)
-+   [FISHMAP](/p/microbialmodelingexchange/wiki/fishmap)
++   *[FISHMAP](/p/microbialmodelingexchange/wiki/fishmap)*
 +   [GroPIN](/p/microbialmodelingexchange/wiki/gropin)
 +   [Listeria Control Model 2012](http://www.corbion.com/lcm)
 +   [Listeria Meat Model](/p/microbialmodelingexchange/wiki/lmm)
&lt;/pre&gt;
&lt;/div&gt;</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Matthias Filter</dc:creator><pubDate>Thu, 20 Aug 2015 03:00:41 -0000</pubDate><guid>https://sourceforge.net8a96df5323cd85b8eb9e35d776ac3a6b27ff2c12</guid></item><item><title>Tools modified by Matthias Filter</title><link>https://sourceforge.net/p/microbialmodelingexchange/wiki/Tools/</link><description>&lt;div class="markdown_content"&gt;&lt;pre&gt;--- v15
+++ v16
@@ -19,16 +19,20 @@
 +   [ComBase Predictor](/p/microbialmodelingexchange/wiki/combase)
 +   [Dairy products safety predictor](/p/microbialmodelingexchange/wiki/dpsp)
 +   [DMRI - predictive models for meat](/p/microbialmodelingexchange/wiki/pmsmp)
++   [E. coli Inactivation in Fermented Meats Model](http://www.foodsafetycentre.com.au/fermenter.php)
++   [EcSF - E. coli SafeFerment](http://www.ifr.ac.uk/safety/EcoliSafeFerment/)
 +   [Food Spoilage and Safety Predictor (FSSP)](/p/microbialmodelingexchange/wiki/fssp)
 +   [FISHMAP](/p/microbialmodelingexchange/wiki/fishmap)
 +   [GroPIN](/p/microbialmodelingexchange/wiki/gropin)
 +   [Listeria Control Model 2012](http://www.corbion.com/lcm)
 +   [Listeria Meat Model](/p/microbialmodelingexchange/wiki/lmm)
 +   [Microbial Responses Viewer (MRV)](/p/microbialmodelingexchange/wiki/mrv)
-+   [Microhibro](/p/microbialmodelingexchange/wiki/microhibro)
++   [MicroHibro](/p/microbialmodelingexchange/wiki/microhibro)
++   [MLA Refrigeration Index Calculator](http://www.foodsafetycentre.com.au/refrigerationindex.php)
 +   [Process lethality determination spreadsheet](http://www.amif.org/process-lethality)
-+   [Refrigeration index calculator](http://www.foodsafetycentre.com.au/refrigerationindex.php)
++   [Perfringens Predictor](http://www.combase.cc/tools/)
 +   [Shelf Stability Predictor](http://www.meathaccp.wisc.edu/ST_calc.html)
++   [Salmonella predictions](http://www.ifr.ac.uk/safety/SalmonellaPredictions/)
 +   [Sym'Previus](/p/microbialmodelingexchange/wiki/symprevius)
 +   [Therm 2.0](http://www.meathaccp.wisc.edu/pathogen_modeling/therm.html)

&lt;/pre&gt;
&lt;/div&gt;</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Matthias Filter</dc:creator><pubDate>Thu, 14 May 2015 16:30:03 -0000</pubDate><guid>https://sourceforge.neta69f6d71cb380560febd32e78a9b9295e5d35869</guid></item><item><title>Tools modified by Matthias Filter</title><link>https://sourceforge.net/p/microbialmodelingexchange/wiki/Tools/</link><description>&lt;div class="markdown_content"&gt;&lt;pre&gt;--- v14
+++ v15
@@ -2,7 +2,7 @@

 These Wiki pages can be continuously maintained, updated and extended by the PMF community.

-**Fitting Tools:**
+**Predictive Microbiology - fitting tools:**

 +   [DMFit](/p/microbialmodelingexchange/wiki/dmfit)
 +   [FILTREX](/p/microbialmodelingexchange/wiki/filtrex)
@@ -13,11 +13,12 @@
 +   [PMM-Lab](/p/microbialmodelingexchange/wiki/pmmlab)

-**Prediction Tools:**
+**Predictive Microbiology - prediction tools:**

 +   [Baseline Software Tool](/p/microbialmodelingexchange/wiki/baseline)
 +   [ComBase Predictor](/p/microbialmodelingexchange/wiki/combase)
 +   [Dairy products safety predictor](/p/microbialmodelingexchange/wiki/dpsp)
++   [DMRI - predictive models for meat](/p/microbialmodelingexchange/wiki/pmsmp)
 +   [Food Spoilage and Safety Predictor (FSSP)](/p/microbialmodelingexchange/wiki/fssp)
 +   [FISHMAP](/p/microbialmodelingexchange/wiki/fishmap)
 +   [GroPIN](/p/microbialmodelingexchange/wiki/gropin)
@@ -25,7 +26,6 @@
 +   [Listeria Meat Model](/p/microbialmodelingexchange/wiki/lmm)
 +   [Microbial Responses Viewer (MRV)](/p/microbialmodelingexchange/wiki/mrv)
 +   [Microhibro](/p/microbialmodelingexchange/wiki/microhibro)
-+   [Prediction of microbial safety in meat products](/p/microbialmodelingexchange/wiki/pmsmp)
 +   [Process lethality determination spreadsheet](http://www.amif.org/process-lethality)
 +   [Refrigeration index calculator](http://www.foodsafetycentre.com.au/refrigerationindex.php)
 +   [Shelf Stability Predictor](http://www.meathaccp.wisc.edu/ST_calc.html)
@@ -33,7 +33,7 @@
 +   [Therm 2.0](http://www.meathaccp.wisc.edu/pathogen_modeling/therm.html)

-**Other Resources:**
+**Other resources:**

 +   [ComBase](/p/microbialmodelingexchange/wiki/combase)
 +   [Emerging Zoonoses Information and Priority systems (EZIPs)](http://ezips.rivm.nl/)
&lt;/pre&gt;
&lt;/div&gt;</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Matthias Filter</dc:creator><pubDate>Mon, 11 May 2015 16:27:04 -0000</pubDate><guid>https://sourceforge.netbe2c1b6664550215c50e13b6ef8419df1266906c</guid></item></channel></rss>