From: Helen P. <par...@eb...> - 2006-07-11 07:45:40
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Arto our files reflect external submissions as well as MAGE-ML generated from our own toola. Try Experiments E-SMDB- prefix from SMD, E-TIGR- prefix from TIGR, and E-BAIR - from an external AE installation. These are a representative set, cheers Helen Arto Viitanen wrote: > mge...@li... wrote: > >> Can anyone recommend other sources of MAGE-ML data files other than >> ArrayExpress and the examples on the MGEDpage? We'd like to test our >> MAGE loader with a wide variety of input data. >> >> >> > MAGE Good Practice (http://www.ebi.ac.uk/~ele/ext/submitter.html#mgp) > has some example XML files. I guess Affymetrix has also some array designs > in MAGE-ML format. Tab2Mage (http://tab2mage.sourceforge.net/) also has > some example files. They are actually in tab format, but the program > converts > them to XML. Since the tab format is easier, the program might help you make > your own XML files easier. > > -- Helen Parkinson, PhD Curation Coordinator Microarray Informatics Team, EBI and Seconded Scientific Programme Manager NCRI Cancer Informatics Initiative www.cancerinformatics.org.uk Tel: EBI 01223 494672 Skype: helen.parkinson.ebi |