MAGEstk do not print indented MAGE-ML
The MAGEReader util in org.biomage.tools.xmlutils
contains an example of how to format the outputted
MAGE-ML. Involves a print of "raw" MAGE-ML to a file
and that parse it with a XMLformat object (part of Xerces)
Would be nice to avoid the printout to file.
Might only be a documentation issue on how to make the
correct argument writer to the writeMAGEML function.
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Seems that the extra printout is unavoidably coupled to the
SAX parsing needing an input stream to parse and thus
trigger SAX events. How to make an input stream directly
from the output of the MAGE-OM is not intuitive...