I'm using tmev on a windows vista machine.
I tried different installations of tmev and none works properly with limma or modules that uses R.
On version 4.6 I managed to run limma but I get always no significant genes, where I know there are…(I ran limma in R on my own, using the same dataset).
I think i have installed tmev correctly.
Any help would be really appreciated.
Can you tell me what (if any) error messages came up in the console when you ran MEV and limma? Getting no significant genes usually means that there's a problem with parameter selection. Can you give me a screenshot of the limma dialog where you selected the parameters? Maybe I can see a problem there.
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