EdgeR issues on linux

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EdgeR issues on linux

Forum: Open Discussion

Creator: Kate.W

Created: 2012-10-03

Updated: 2013-05-20

Kate.W - 2012-10-03

Hello,

I have been trying to run differential expression using the integrated edgeR module. When I launch EdgeR module, I get the following message:

R JRI lib: /data/MeV_4_8_1/lib/libjri.sodoes not exist.

Indeed, when I check the folder, there is no such file… I tried downloading it again, but no, no such file. Any hint? Thanks!

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Martin Abba - 2012-11-17

Hi Kate-w
Did you solved the edgeR - linux issues?
I have the same problem with all the RNAseq tools from MeV in Ubuntu.
Best,
Martin

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Kate.W - 2012-11-21

Hi Martin,

nope… I got tired of wasting my time after a while… It works well on PC though! If you have any solution, keep us posted! Cheers,

K8

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