how to build the database ?

Binner for assembled metagenomes

Status: Beta

Brought to you by: kinestetika

how to build the database ?

Forum: General Discussion

Creator: Shawn MOK

Created: 2017-11-14

Updated: 2017-12-19

Shawn MOK - 2017-11-14

Dear Kinestetika,
Hello, I am trying to set up metawatt.
But sadly, it seems that the database http://coe30.coe.ucalgary.ca/~mstrous/metawatt-databases.tar.gz is no longer accessible.
Could you give me some advices to fix this problem? And long for you reply! Many thanks!
Shawn MOK

alternate

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palomo11 - 2017-12-07

Dear Shawn (or Marc),

Were you able to to biuld the database?

Is there any where we can find an accessible database?

Thanks in advance!

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Vimac Nolla - 2017-12-19

Hi,

The easiest way to update the databases is to directly run the first module of the pipeline, "Update databases". This will update the provided databases (see "Update databases" pipeline module wiki).

I hope this helps.

Vimac

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