Test assembly not running

[Karsten Liere]

Hi,

I successfully compiled Metassembler 1.3 on Ubuntu 14.04. However, when running the sample assembly, the process simply stops:

Number of input assemblies: 2

---------- Run bash command ----------

Ncoords:
Ncoords -N ./MergeMetassemble/A/A.fa -D ./MergeMetassemble/A/ ...

Error running Ncoords -N ./MergeMetassemble/A/A.fa -D ./MergeMetassemble/A/

Any idea where to look into?

Best wishes,

Karsten

[Alejandro Hernandez Wences]

Hi,

Just add the /bin directory to your PATH. There is a small bug in the
metassemble script related to paths to binaries. It will be fixed if all
the programs are visible to your PATH. This will be mended shortly.

Wences

On Tue, Mar 24, 2015 at 7:26 AM, Karsten Liere kliere@users.sf.net wrote:

Hi,

I successfully compiled Metassembler 1.3 on Ubuntu 14.04. However, whem
running the sample assembly, the process simply stops:

Number of input assemblies: 2

---------- Run bash command ----------

Ncoords:
Ncoords -N ./MergeMetassemble/A/A.fa -D ./MergeMetassemble/A/ ...

Error running Ncoords -N ./MergeMetassemble/A/A.fa -D ./MergeMetassemble/A/

Any idea where to look into?

Best wishes,

Karsten

Test assembly not running
https://sourceforge.net/p/metassembler/discussion/general/thread/741ddd68/?limit=25#7a4f

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[Karsten Liere]

Ah - great - thank you! Works now.

Best wishes,

Karsten