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Re: [mesa-users] Installing MESA
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From: Richard T. <tow...@as...> - 2012-04-11 21:48:19
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Please could you send the new 'ls -l', and also let me know the actual name of the file you unpacked into /opt. cheers, Rich On Apr 11, 2012, at 4:46 PM, Jared Brooks wrote: > I changed those permissions, and those changes were reflected by a ls -l, but it is still denying me permission. > > I downloaded the Linux 64 bit SDK from this page: http://www.astro.wisc.edu/~townsend/static.php?ref=mesasdk > > -Jared > > On Wed, Apr 11, 2012 at 2:37 PM, Richard Townsend <tow...@as...> wrote: > As root user, execute the following: > > chmod 755 /opt/mesasdk/bin/mesasdk_init.csh > chmod 755 /opt/mesasdk/bin/mesasdk_init.sh > > I'm not sure what led to this problem; what version of the SDK are you using (i.e., what file did you download)? > > cheers, > > Rich > > On Apr 11, 2012, at 4:34 PM, Jared Brooks wrote: > >> jared@ubuntu:/opt/mesasdk/bin$ ls -l /opt/mesasdk/bin >> total 24536 >> -rwxr-xr-x 4 500 500 2153392 2012-01-20 09:54 c++ >> -rwxr-xr-x 1 500 500 2150346 2012-01-20 09:54 cpp >> -rwxr-xr-x 1 500 500 77266 2012-01-20 10:03 fpx3 >> -rwxr-xr-x 1 500 500 2564 2012-01-20 10:03 fpx3_deps >> -rwxr-xr-x 4 500 500 2153392 2012-01-20 09:54 g++ >> -rwxr-xr-x 3 500 500 2147774 2012-01-20 09:54 gcc >> -rwxr-xr-x 2 500 500 119881 2012-01-20 09:54 gcc-ar >> -rwxr-xr-x 2 500 500 119817 2012-01-20 09:54 gcc-nm >> -rwxr-xr-x 2 500 500 119837 2012-01-20 09:54 gcc-ranlib >> -rwxr-xr-x 1 500 500 1086658 2012-01-20 09:54 gcov >> -rwxr-xr-x 2 500 500 2160578 2012-01-20 09:54 gfortran >> -rwxr-xr-x 1 500 500 41082 2012-01-20 10:02 gif2h5 >> -rwxr-xr-x 1 500 500 38244 2012-01-20 10:02 h52gif >> -rwxr-xr-x 1 500 500 12551 2012-01-20 10:02 h5cc >> -rwxr-xr-x 1 500 500 112948 2012-01-20 10:02 h5copy >> -rwxr-xr-x 1 500 500 19590 2012-01-20 10:02 h5debug >> -rwxr-xr-x 1 500 500 229329 2012-01-20 10:02 h5diff >> -rwxr-xr-x 1 500 500 197313 2012-01-20 10:02 h5dump >> -rwxr-xr-x 1 500 500 11693 2012-01-20 10:02 h5fc >> -rwxr-xr-x 1 500 500 79908 2012-01-20 10:02 h5import >> -rwxr-xr-x 1 500 500 35368 2012-01-20 10:02 h5jam >> -rwxr-xr-x 1 500 500 141757 2012-01-20 10:02 h5ls >> -rwxr-xr-x 1 500 500 111278 2012-01-20 10:02 h5mkgrp >> -rwxr-xr-x 1 500 500 69706 2012-01-20 10:02 h5perf_serial >> -rwxr-xr-x 1 500 500 4434 2012-01-20 10:02 h5redeploy >> -rwxr-xr-x 1 500 500 169697 2012-01-20 10:02 h5repack >> -rwxr-xr-x 1 500 500 15639 2012-01-20 10:02 h5repart >> -rwxr-xr-x 1 500 500 122193 2012-01-20 10:02 h5stat >> -rwxr-xr-x 1 500 500 32235 2012-01-20 10:02 h5unjam >> -rwxr-xr-x 1 500 500 1137 2012-01-20 10:03 mesasdk_arch_check.pl >> -rwxr-xr-x 1 500 500 71 2012-01-20 09:55 mesasdk_blas_link >> -rwxr-xr-x 1 500 500 89 2012-01-20 10:03 mesasdk_hdf5_link >> -rwxrwx--- 1 500 500 835 2012-01-20 10:03 mesasdk_init.csh >> -rwxrwx--- 1 500 500 611 2012-01-20 10:03 mesasdk_init.sh >> -rwxr-xr-x 1 500 500 101 2012-01-20 09:58 mesasdk_lapack95_link >> -rwxr-xr-x 1 500 500 95 2012-01-20 09:56 mesasdk_lapack_link >> -rwxr-xr-x 1 500 500 83 2012-01-20 09:58 mesasdk_pgplot_link >> -rwxr-xr-x 1 500 500 86 2012-01-20 10:03 mesasdk_se_link >> -rwxr-xr-x 2 500 500 42426 2012-01-20 10:03 ndiff >> -rwxr-xr-x 2 500 500 42426 2012-01-20 10:03 ndiff-2.00 >> -rwxr-xr-x 1 500 500 12512 2012-01-20 10:03 touchse >> -rwxr-xr-x 4 500 500 2153392 2012-01-20 09:54 x86_64-pc-linux-gnu-c++ >> -rwxr-xr-x 4 500 500 2153392 2012-01-20 09:54 x86_64-pc-linux-gnu-g++ >> -rwxr-xr-x 3 500 500 2147774 2012-01-20 09:54 x86_64-pc-linux-gnu-gcc >> -rwxr-xr-x 3 500 500 2147774 2012-01-20 09:54 x86_64-pc-linux-gnu-gcc-4.7.0 >> -rwxr-xr-x 2 500 500 119881 2012-01-20 09:54 x86_64-pc-linux-gnu-gcc-ar >> -rwxr-xr-x 2 500 500 119817 2012-01-20 09:54 x86_64-pc-linux-gnu-gcc-nm >> -rwxr-xr-x 2 500 500 119837 2012-01-20 09:54 x86_64-pc-linux-gnu-gcc-ranlib >> -rwxr-xr-x 2 500 500 2160578 2012-01-20 09:54 x86_64-pc-linux-gnu-gfortran >> jared@ubuntu:/opt/mesasdk/bin$ more mesasdk_init.sh >> mesasdk_init.sh: Permission denied >> >> It looks like I should be able to access all these files, but for some reason it's still keeping me out >> >> -Jared >> >> >> On Wed, Apr 11, 2012 at 2:30 PM, Richard Townsend <tow...@as...> wrote: >> Could you post the output from 'ls -l /opt/mesasdk/bin'. That will show what permission problems may exist. >> >> On Apr 11, 2012, at 4:27 PM, Jared Brooks wrote: >> >>> Here's a command I found concerning PATH in my .profile: >>> >>> # set PATH so it includes user's private bin if it exists >>> if [ -d "$HOME/bin" ] ; then >>> PATH="$HOME/bin:$PATH" >>> fi >>> >>> And here's the output to that source command: >>> >>> jared@ubuntu:~/mesa$ source $MESASDK_ROOT/bin/mesasdk_init.sh >>> bash: /opt/mesasdk/bin/mesasdk_init.sh: Permission denied >>> >>> I've had a hunch that permissions were at the source of my problems, but I still don't understand why it's keeping me out. >>> >>> -Jared >>> >>> On Wed, Apr 11, 2012 at 2:20 PM, Richard Townsend <tow...@as...> wrote: >>> OK, thanks. Please post the output when you run >>> >>> source $MESASDK_ROOT/bin/mesasdk_init.sh >>> >>> Also, please confirm that you don't have anything else in your .profile startup script which overwrites the PATH environment variable. >>> >>> cheers, >>> >>> Rich >>> >>> On Apr 11, 2012, at 4:17 PM, Jared Brooks wrote: >>> >>>> jared@ubuntu:~/mesa$ which gfortran >>>> jared@ubuntu:~/mesa$ echo $MESASDK_ROOT >>>> /opt/mesasdk >>>> jared@ubuntu:~/mesa$ echo $PATH >>>> /usr/lib/lightdm/lightdm:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games >>>> >>>> -Jared >>>> >>>> On Wed, Apr 11, 2012 at 2:14 PM, Richard Townsend <tow...@as...> wrote: >>>> After you get the 'make: gfortran: Command not found', please run the following commands and post the output: >>>> >>>> which gfortran >>>> >>>> echo $MESASDK_ROOT >>>> >>>> echo $PATH >>>> >>>> cheers, >>>> >>>> Rich >>>> >>>> On Apr 11, 2012, at 4:10 PM, Jared Brooks wrote: >>>> >>>>> I have had these commands in my .profile >>>>> >>>>> export MESASDK_ROOT=/opt/mesasdk >>>>> source $MESASDK_ROOT/bin/mesasdk_init.sh >>>>> export OMP_NUM_THREADS=4 >>>>> export LIBRARY_PATH=/usr/lib/x86_64-linux-gnu >>>>> export LD_RUN_PATH=/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu >>>>> >>>>> -Jared >>>>> >>>>> On Wed, Apr 11, 2012 at 1:53 PM, Richard Townsend <tow...@as...> wrote: >>>>> Have you initialized the SDK properly using the appropriate script? You have to do this each time you log in -- or add a line to your start-up file (.cshrc, .bashrc, etc.) >>>>> >>>>> On Apr 11, 2012, at 3:33 PM, Jared Brooks wrote: >>>>> >>>>> > Hello, I'm running Ubuntu and I can't get MESA installed completely. I'm using the MESA_SDK and I followed the FAQ, yet I'm still stuck. I got the install script to run for a few hours before it stopped and now will only give me this: >>>>> > >>>>> > jared@ubuntu:~/mesa$ ./install >>>>> > checking if ndiff is installed ... >>>>> > yes! >>>>> > >>>>> > /home/jared/mesa/const >>>>> > building const package. >>>>> > >>>>> > gfortran -fno-range-check -fopenmp -I../public -I../private -I../../include -Wunused-value -Werror -W -fimplicit-none -O2 -c -ffixed-form -ffixed-line-length-132 ../public/const_def.f >>>>> > make: gfortran: Command not found >>>>> > make: *** [const_def.o] Error 127 >>>>> > >>>>> > /home/jared/mesa/const/make >>>>> > FAILED >>>>> > >>>>> > >>>>> > /home/jared/mesa/const >>>>> > ./build_and_test FAILED >>>>> > >>>>> > >>>>> > And I found this message in the file mesa/const/test/tmp.txt: >>>>> > >>>>> > ./tester: error while loading shared libraries: libgfortran.so.3: cannot open shared object file: No such file or directory >>>>> > >>>>> > I found the file libgfortran.so.3 in /opt/mesasdk/lib64/, it seems to be just a pointer to libgfortran.so.3.0.0. >>>>> > >>>>> > -Jared >>>>> > ------------------------------------------------------------------------------ >>>>> > Better than sec? 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