graphical summary of chains (in R/rjags)

  • Anonymous - 2010-07-13


    Is there a way to get nice graphical summaries for MCMC results from JAGS in
    R, similarly to the graphical output of R's bugs() function? I found no
    function for this in rjags.

  • Russell Almond

    Russell Almond - 2010-07-13

    Jags will export the output in a way that can be read by the R Coda package
    ( This was the
    old pre-WinBugs way of doing things.

    While it is not a convenient for monitory convergence, it is ultimately better
    as R & coda will allow you to produce high-quality customize graphics for the
    final presentation.

    Martyn kindly maintains both JAGS and Coda.


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