[Maxent-commit] CVS: maxent CHANGES,1.15,1.16 build.xml,1.18,1.19

[Jason B. <jas...@us...>]

Update of /cvsroot/maxent/maxent
In directory sc8-pr-cvs1:/tmp/cvs-serv18160

Modified Files:
	CHANGES build.xml 
Log Message:
Made release of v2.0

Index: CHANGES
===================================================================
RCS file: /cvsroot/maxent/maxent/CHANGES,v
retrieving revision 1.15
retrieving revision 1.16
diff -C2 -d -r1.15 -r1.16
*** CHANGES	30 Apr 2002 08:48:35 -0000	1.15
--- CHANGES	12 Dec 2002 12:18:31 -0000	1.16
***************
*** 1,2 ****
--- 1,40 ----
+ 2.1.0
+ -----
+ 
+ 
+ 
+ 
+ 2.0 (Major improvements)
+ ---
+ Fixed bug where singleton events are dropped. (Tom)
+ 
+ Added eval method so distribution could be passed in rathar then
+ allocated durring each call.  Left old interface in place but modified
+ it to use the new eval method.  Also made numfeats a class level
+ variable. (Tom)
+ 
+ Fixed cases where parameters which only occured with a single output
+ weren't getting updated.  Ended up getting rid of pabi and cfvals
+ structures.  These have been replaced with the data for a single event,
+ double[] modelDistribution, and this is used to update the modifiers
+ for a single event and then updated for each additional event.  This
+ change made it easier to initialize the modleDistribution to the
+ uniform distribution which was necessary to fix teh above problem.
+ Also moved the computation of modelDistribution into it's own routine
+ which is name eval and is almost exactly the same as GISModel.eval w/o
+ doing the context string to integer mappings. (Tom)
+ 
+ Made correction constant non-optional.  When the events all have the same
+ number of contexts then the model tries to make the expected value of the
+ correction constant nearly 0.  This is needed because while the number of
+ contexts may be same it is very unlikly that all context occur with all
+ outcomes. (Tom)
+ 
+ Made nextIteration return a double which is the log-likelihood from
+ the previous itteration.  At some point there isn't enough accuracy in
+ a double to make further iterations useful so the routine may stop
+ prematurly when the decrease in log-likelihood is too small. (Tom)
+ 
+ 
  1.2.10
  ------

Index: build.xml
===================================================================
RCS file: /cvsroot/maxent/maxent/build.xml,v
retrieving revision 1.18
retrieving revision 1.19
diff -C2 -d -r1.18 -r1.19
*** build.xml	19 Apr 2002 12:34:02 -0000	1.18
--- build.xml	12 Dec 2002 12:18:31 -0000	1.19
***************
*** 10,14 ****
      <property name="Name" value="Maxent"/>
      <property name="name" value="maxent"/>
!     <property name="version" value="1.2.10"/>
      <property name="year" value="2002"/>
  
--- 10,14 ----
      <property name="Name" value="Maxent"/>
      <property name="name" value="maxent"/>
!     <property name="version" value="2.1.0"/>
      <property name="year" value="2002"/>