Same contigs in multiple bins
An automatic tool for binning metagenomics sequences
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Good morning,
I have been assembling and binning some PacBio CCS reads using metaflye and Maxbin2. Digging into the bins, I notice that some of the same contigs end up in multiple bins. I am new to metagenome binning so I don't know if this is the way it is. It doesn't seem right to me.
Can you please confirm whether this is unusual?
Thanks!
Viola