[Mauve-users] Mauve statistics

[Mathias L. (G. box) <m.l...@gm...>]

Hi all,

I’d be grateful if I could get help on how to obtain summary statistics on alignments that Mauve produces. 

What I am looking for is a summary of the rank position, size, start-stop of each ’block’ that Mauve identifies, for each compared sequence. 

From these statistics I aim to calculate a kind of re-shuffling score between two sequences.

Thanks very much,
Mathias