[Mauve-users] How to deal with 49 bacterial genomes

[LiXiangchen <lix...@ou...>]

Hi all,

I used to run progressiveMauve with 49 bacterial genomes, each genome is about 13MB. The job has been running for three weeks and is still running now. Since I just use all default parameters, I have no idea to improve it.

Can you give me any suggestions? I am very grateful.