[Mauve-users] MAUVE draft genome alignment

[Mohan A. <moh...@gm...>]

I am Mohan Amarasiri from Hokkaido University. I am using the MAUVE
software for constructing a draft genome of a bacterium isolated in our
lab. I went through the 2009 paper and succeeded in obtaining the fasta
file as the output.

However, in the output file I can only see the contig order has been
changed. But they haven't been joined to make the complete draft genome. In
this case what is the next step to be taken?

If you can help me with this, it would be of great help. Please apologize
me for taking your valuable time.

-- 
*Mohan Amarasiri*
*Water Quality Control Engineering Laboratory*


*Graduate School of EngineeringHokkaido UniversitySapporo 060-8628, Japan*

*http://www.eng.hokudai.ac.jp/labo/water/English/E_memberMohanAmarasiri.html
<http://www.eng.hokudai.ac.jp/labo/water/English/E_memberMohanAmarasiri.html>*