#64 a workaround for mauveAligner: symbol lookup error: mauveAligner: undefined symbol: _ZN6genome10gnSequence10LoadSourceESs

[Oren Milman]

Not sure this is the right place for this, but just wanted to let people know:
After installing mauve using:
conda install -c bioconda mauve

I ran into the following error upon the most simple use case (i.e.: mauveAligner multi_fasta_file_path):
mauveAligner: symbol lookup error: mauveAligner: undefined symbol: _ZN6genome10gnSequence10LoadSourceESs

progressiveMauve had the same problem.

Finally, I managed to find a workaround that allowed me to use progressiveMauve only: I removed the mauve package, and then used:
conda install -c bioconda progressivemauve=snapshot_2015_02_13

Thanks!

[Oren Milman]

I have created the ticket twice accidentally (on the first time, sourceforge told me that creating the ticket failed).
I apologize. Please close (or delete, if possible) this duplicate.