A software tool enabling the user to browse through an image stack created by a confocal microscope. Points can be plotted through the stack, producing a digital 3D representation, which can be viewed in 3D and compared with other plots.

Features

  • Read LSM Image Files
  • Produce a 3D Alpha-Blended Volume Rendered View
  • Render digital plot to 3D
  • Compare (graphically) multiple 3D plots
  • Calculate lengths in micron and pixel for 3D lengths.

Project Samples

01: Screenshot of an opened LSM image file and plot. 03: 2D Bezier Curve Plotting Application (via Perspectives) 02: View produced by the compression viewer perspective

Project Activity

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Categories

3D Rendering, Bio-Informatics, Research

License

Academic Free License (AFL)

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LSM Stack Browser & 3D Plotter Web Site

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Additional Project Details

Operating Systems

BSD, Linux, Windows

Languages

English

Intended Audience

Advanced End Users, Education, Information Technology, Science/Research

User Interface

Java AWT, Java Swing

Programming Language

Java

Related Categories

Java 3D Rendering Software, Java Bio-Informatics Software, Java Research Software

Registered

2009-11-20
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