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#10 SED-ML web tools not returning results

1.0
closed
nobody
None
2017-07-27
2017-07-24
No

Hi Frank,
I am trying to get combine archives with results from the SED-ML WebTools. But somehow the various methods are currently not working.

When trying via the web service I get a strange color error with the attached example

curl -F file=@"repeated-stochastic-runs.omex" -o result.omex http://sysbioapps.dyndns.org/SED-ML_Web_Tools/Home/SimulatePostArchive

Error ===== Your request could not be processed. Please verify your archive and if the problem persists, contact the author with the following information. Detailed Information: Message: Method not found: 'Void libSedML.CurveStyle.set_Color(System.String)'. Stacktrace: at libSedMLRunner.SimpleRunner.AddPlotToControl(ZedGraphControl control, Plot2DResult plot) at libSedMLRunner.SedMLRunner.ComputeResults(SedMLInfo info, Boolean storeRawData) at SED_MLWeb.Controllers.HomeController.SimulatePostArchive(HttpPostedFileBase imagefile)

When loading the same omex in the Web Interface and clicking "Download as SED-ML archive" I get

```
Server Error in '/SED-ML_Web_Tools' Application.
Could not load file or assembly 'ICSharpCode.SharpZipLib, Version=0.86.0.518, Culture=neutral, PublicKeyToken=null' or one of its dependencies. The located assembly's manifest definition does not match the assembly reference. (Exception from HRESULT: 0x80131040)
Description: An unhandled exception occurred during the execution of the current web request. Please review the stack trace for more information about the error and where it originated in the code.

Exception Details: System.IO.FileLoadException: Could not load file or assembly 'ICSharpCode.SharpZipLib, Version=0.86.0.518, Culture=neutral, PublicKeyToken=null' or one of its dependencies. The located assembly's manifest definition does not match the assembly reference. (Exception from HRESULT: 0x80131040)
```

When clicking on "Download on combine archive (with results)" I get

An error occured during the simulation. Please be sure that the SED-ML file you uploaded contains all models (this will be the case if you use a SED-ML archive, or if your models are located on the web available for download.)

The direct PDF/SVG download of the result image is also not working because the result is too big (right click on image and download PDF/SVG):
413 Request Entity Too Large

  I need somehow a way to get the archive with the outputs (preferable via the web service).

  Simulation is working fine. Only having problems with getting the outputs. 
  The SVG and PDF storage is working fine for other models, but having the same issues with saving the archives with results or trying to get the results via the webservice.
  Best Matthias
1 Attachments

Discussion

  • Frank Bergmann

    Frank Bergmann - 2017-07-26

    Thanks for letting me know, I've redeployed the application with the correct version of the compression library. It should just work now.

     
  • Matthias König

    Matthias König - 2017-07-26

    Everything working now. Thanks a lot. Can be closed.
    M

     
  • Frank Bergmann

    Frank Bergmann - 2017-07-27
    • status: open --> closed
     
  • Frank Bergmann

    Frank Bergmann - 2017-07-27

    Thanks!

     

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