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From: Michael T. <tsi...@gm...> - 2013-07-15 08:21:57
|
Hi Russell, thank you so much for your quick response and help. I am confirming that the latest version LGL.1.D3 worked. I am providing further version information for reference: Ubuntu 10.04 with the latest gcc (from apt), tested on the 2005 opte lgl dataset. I was able to build coordinates and view the result with oracle java 8. Best, Michael Tsikerdekis On Mon, Jul 15, 2013 at 5:19 AM, Russell Standish <hp...@hp...>wrote: > Hi Michael, > > Version 1.1 is unfortunately rather old. In the subversion repository > is a version that builds with the most recent boost graph library > (although I haven't checked for a few years). I thought I had made a > file release of that, at the time, but clearly I have been negligent. > > So please feel free to check out the subversion head, and build with > that - I will create a new LGL file release shortly. > > Cheers > > On Sat, Jul 13, 2013 at 05:36:28PM +0200, Michael Tsikerdekis wrote: > > Hello, > > I know that this is probably one of the most discussed issues with LGL > and > > unfortunately I have the same issue. > > > > I've downloaded LGL 1.1 under Ubuntu 10.04. I've tried to build it with > > boost 1.30.2, 1.33.2 and 1.54.0 but with no success. > > > > I've attached my log in case someone can help me find a solution or > provide > > me with the ideal packages and versions that can build LGL. > > > > I am building a large network with millions of nodes and LGL is perfect. > > > > I appreciate all the help you can provide me with this. > > > > Best, > > Michael Tsikerdekis > > > > > ------------------------------------------------------------------------------ > > See everything from the browser to the database with AppDynamics > > Get end-to-end visibility with application monitoring from AppDynamics > > Isolate bottlenecks and diagnose root cause in seconds. > > Start your free trial of AppDynamics Pro today! > > > http://pubads.g.doubleclick.net/gampad/clk?id=48808831&iu=/4140/ostg.clktrk > > > _______________________________________________ > > Lgl-developer mailing list > > Lgl...@li... > > https://lists.sourceforge.net/lists/listinfo/lgl-developer > > > -- > > > ---------------------------------------------------------------------------- > Prof Russell Standish Phone 0425 253119 (mobile) > Principal, High Performance Coders > Visiting Professor of Mathematics hp...@hp... > University of New South Wales http://www.hpcoders.com.au > > ---------------------------------------------------------------------------- > |
|
From: Russell S. <hp...@hp...> - 2013-07-15 04:10:16
|
Hi Michael, Version 1.1 is unfortunately rather old. In the subversion repository is a version that builds with the most recent boost graph library (although I haven't checked for a few years). I thought I had made a file release of that, at the time, but clearly I have been negligent. So please feel free to check out the subversion head, and build with that - I will create a new LGL file release shortly. Cheers On Sat, Jul 13, 2013 at 05:36:28PM +0200, Michael Tsikerdekis wrote: > Hello, > I know that this is probably one of the most discussed issues with LGL and > unfortunately I have the same issue. > > I've downloaded LGL 1.1 under Ubuntu 10.04. I've tried to build it with > boost 1.30.2, 1.33.2 and 1.54.0 but with no success. > > I've attached my log in case someone can help me find a solution or provide > me with the ideal packages and versions that can build LGL. > > I am building a large network with millions of nodes and LGL is perfect. > > I appreciate all the help you can provide me with this. > > Best, > Michael Tsikerdekis > ------------------------------------------------------------------------------ > See everything from the browser to the database with AppDynamics > Get end-to-end visibility with application monitoring from AppDynamics > Isolate bottlenecks and diagnose root cause in seconds. > Start your free trial of AppDynamics Pro today! > http://pubads.g.doubleclick.net/gampad/clk?id=48808831&iu=/4140/ostg.clktrk > _______________________________________________ > Lgl-developer mailing list > Lgl...@li... > https://lists.sourceforge.net/lists/listinfo/lgl-developer -- ---------------------------------------------------------------------------- Prof Russell Standish Phone 0425 253119 (mobile) Principal, High Performance Coders Visiting Professor of Mathematics hp...@hp... University of New South Wales http://www.hpcoders.com.au ---------------------------------------------------------------------------- |
|
From: Barrett L. <bl...@bl...> - 2006-07-28 21:48:44
|
Yeah I caught that after a bit, looking good now! I'm just stupid. ;)
On Jul 26, 2006, at 6:02 AM, Russell Standish wrote:
> It seems that a space is essential between the # and node name, ie
>
> # 1
> a
> # 2
> a
> # 3
> a
> ..
>
> seems to produce sane results.
>
> Cheers
>
> On Wed, Jul 26, 2006 at 05:22:52PM -0700, Barrett Lyon wrote:
>> -----BEGIN PGP SIGNED MESSAGE-----
>> Hash: SHA1
>>
>> Sanity check, did I do the LGL correct? I think that was the right
>> format?
>>
>>
>> On Jul 26, 2006, at 5:06 PM, Barrett Lyon wrote:
>>
>>> 1.1 seemingly built great but here is the problem I ran into:
>>>
>>> Here is my test.lgl graph:
>>> #1
>>> a
>>> #2
>>> a
>>> #3
>>> a
>>> #4
>>> a
>>> #5
>>> a
>>>
>>> I run lglayout2d:
>>>
>>> ramsan1# ./lglayout2D ./test.lgl
>>> Reading in Graph from ./test.lgl...
>>> Vertex Count: 7
>>> Edge Count: 6
>>> Outer radius is set to 2.64575
>>> Initializing 7 particles...Done.
>>> Initializing grid and placing particles...Done.
>>> Initializing handlers...Done.
>>> Generating Tree and checking for root.
>>> Nodes Checked: 8
>>> Root Node:
>>> There are 1 levels.
>>> Initializing 1 thread(s)...Done.
>>> Iteration: 151 Dx: 0.835668 Level: 1
>>> Final Settle
>>> Iteration: 203 Dx: 0.832478 Level: 1
>>> - Done -
>>>
>>>
>>> The output is resulting as:
>>> ramsan1# cat lgl.out
>>>
>>>
>>>
>>> 1.94582 1.00213
>>> #1 2.57455 0.435078
>>> a 1.19351 0.670472
>>> #2 2.04038 1.82853
>>> #3 2.72835 1.24933
>>> #4 1.82669 0.18091
>>> #5 1.25832 1.4913
>>>
>>>
>>> Notice the first line, it's full of tabs or something that is high
>>> ASCII. When I try to run imagemaker on it I get errors and no
>>> built graph. I tried removing the first line and also ran into the
>>> same imagemaker error. I attached the full lgl.out so you can see
>>> what the first line looks like.
>>>
>>> Any ideas?
>>>
>>> -Barrett
>>>
>>> <lgl.out>
>>>
>>> On Jul 26, 2006, at 5:17 AM, Russell Standish wrote:
>>>
>>>> I have only used 1.1. Maybe Alex knows.
>>>>
>>>> However, I have noticed that the algorithm is sensitive to graph
>>>> structure - eg I think the graph has to be connected for instance,
>>>> otherwise the unconnected parts get thrown to infinity (or 1
>>>> million
>>>> if that's larger :) )
>>>>
>>>> Cheers
>>>>
>>>> On Wed, Jul 26, 2006 at 01:58:59PM -0700, Barrett Lyon wrote:
>>>>> Based on my last build of 1.1 I ran into some really odd coords
>>>>> output from lglayout2d causing ImageMaker to crash. I was
>>>>> looking in
>>>>> the lgl.out data and the first line is garbled tabs or
>>>>> something and
>>>>> the coords must be kinda off causing ImageMaker to choke.
>>>>>
>>>>> Any ideas? Has anything major changed from 1.0 to 1.1?
>>>>>
>>>>> -Barrett
>>>>>
>>>>>
>>>>>
>>>>> Barrett Lyon
>>>>> email/sip/iax: bl...@bl...
>>>>> cell: +1.916.387.8649
>>>>>
>>>>
>>>> -- *PS: A number of people ask me about the attachment to my
>>>> email, which
>>>> is of type "application/pgp-signature". Don't worry, it is not a
>>>> virus. It is an electronic signature, that may be used to verify
>>>> this
>>>> email came from me if you have PGP or GPG installed. Otherwise, you
>>>> may safely ignore this attachment.
>>>>
>>>> -------------------------------------------------------------------
>>>> --
>>>> -------
>>>> A/Prof Russell Standish Phone 8308 3119 (mobile)
>>>> Mathematics 0425 253119 (")
>>>> UNSW SYDNEY 2052 R.S...@un...
>>>> Australia http://
>>>> parallel.hpc.unsw.edu.au/rks
>>>> International prefix +612, Interstate prefix 02
>>>> -------------------------------------------------------------------
>>>> --
>>>> -------
>>>
>>
>> -----BEGIN PGP SIGNATURE-----
>> Version: GnuPG v1.4.3 (Darwin)
>>
>> iD8DBQFEyAdcjP38jjmp91IRAkdaAKDMQzcyREUYYy8wpZcNXccoOl3scwCfU+lV
>> cxaAeszzF0rHClY0F6p+iPQ=
>> =lPe5
>> -----END PGP SIGNATURE-----
>
> --
> *PS: A number of people ask me about the attachment to my email, which
> is of type "application/pgp-signature". Don't worry, it is not a
> virus. It is an electronic signature, that may be used to verify this
> email came from me if you have PGP or GPG installed. Otherwise, you
> may safely ignore this attachment.
>
> ----------------------------------------------------------------------
> ------
> A/Prof Russell Standish Phone 8308 3119 (mobile)
> Mathematics 0425 253119 (")
> UNSW SYDNEY 2052 R.S...@un...
> Australia http://
> parallel.hpc.unsw.edu.au/rks
> International prefix +612, Interstate prefix 02
> ----------------------------------------------------------------------
> ------
|
|
From: Barrett L. <bl...@bl...> - 2006-07-28 21:42:54
|
1.1 seemingly built great but here is the problem I ran into:
Here is my test.lgl graph:
#1
a
#2
a
#3
a
#4
a
#5
a
I run lglayout2d:
ramsan1# ./lglayout2D ./test.lgl
Reading in Graph from ./test.lgl...
Vertex Count: 7
Edge Count: 6
Outer radius is set to 2.64575
Initializing 7 particles...Done.
Initializing grid and placing particles...Done.
Initializing handlers...Done.
Generating Tree and checking for root.
Nodes Checked: 8
Root Node:
There are 1 levels.
Initializing 1 thread(s)...Done.
Iteration: 151 Dx: 0.835668 Level: 1
Final Settle
Iteration: 203 Dx: 0.832478 Level: 1
- Done -
The output is resulting as:
ramsan1# cat lgl.out
1.94582 1.00213
#1 2.57455 0.435078
a 1.19351 0.670472
#2 2.04038 1.82853
#3 2.72835 1.24933
#4 1.82669 0.18091
#5 1.25832 1.4913
Notice the first line, it's full of tabs or something that is high
ASCII. When I try to run imagemaker on it I get errors and no built
graph. I tried removing the first line and also ran into the same
imagemaker error. I attached the full lgl.out so you can see what
the first line looks like.
Any ideas?
-Barrett
|
|
From: Alex A. <ale...@gm...> - 2006-07-28 20:27:49
|
That is probably a good indication there should be some sanity checks for
formatting by LGL. I would have thought LGL would have crashed. Glad it
worked.
cheers,
alex
On 7/26/06, Barrett Lyon <bl...@bl...> wrote:
>
> -----BEGIN PGP SIGNED MESSAGE-----
> Hash: SHA1
>
> I think I should have RTFM a little better, my example did not have a
> space between the # and the edge. I think it's working now.
>
> - -B
>
> On Jul 26, 2006, at 5:22 PM, Barrett Lyon wrote:
>
> > -----BEGIN PGP SIGNED MESSAGE-----
> > Hash: SHA1
> >
> > Sanity check, did I do the LGL correct? I think that was the right
> > format?
> >
> >
> > On Jul 26, 2006, at 5:06 PM, Barrett Lyon wrote:
> >
> >> 1.1 seemingly built great but here is the problem I ran into:
> >>
> >> Here is my test.lgl graph:
> >> #1
> >> a
> >> #2
> >> a
> >> #3
> >> a
> >> #4
> >> a
> >> #5
> >> a
> >>
> >> I run lglayout2d:
> >>
> >> ramsan1# ./lglayout2D ./test.lgl
> >> Reading in Graph from ./test.lgl...
> >> Vertex Count: 7
> >> Edge Count: 6
> >> Outer radius is set to 2.64575
> >> Initializing 7 particles...Done.
> >> Initializing grid and placing particles...Done.
> >> Initializing handlers...Done.
> >> Generating Tree and checking for root.
> >> Nodes Checked: 8
> >> Root Node:
> >> There are 1 levels.
> >> Initializing 1 thread(s)...Done.
> >> Iteration: 151 Dx: 0.835668 Level: 1
> >> Final Settle
> >> Iteration: 203 Dx: 0.832478 Level: 1
> >> - Done -
> >>
> >>
> >> The output is resulting as:
> >> ramsan1# cat lgl.out
> >>
> >>
> >>
> >> 1.94582 1.00213
> >> #1 2.57455 0.435078
> >> a 1.19351 0.670472
> >> #2 2.04038 1.82853
> >> #3 2.72835 1.24933
> >> #4 1.82669 0.18091
> >> #5 1.25832 1.4913
> >>
> >>
> >> Notice the first line, it's full of tabs or something that is high
> >> ASCII. When I try to run imagemaker on it I get errors and no
> >> built graph. I tried removing the first line and also ran into
> >> the same imagemaker error. I attached the full lgl.out so you can
> >> see what the first line looks like.
> >>
> >> Any ideas?
> >>
> >> -Barrett
> >>
> >> <lgl.out>
> >>
> >> On Jul 26, 2006, at 5:17 AM, Russell Standish wrote:
> >>
> >>> I have only used 1.1. Maybe Alex knows.
> >>>
> >>> However, I have noticed that the algorithm is sensitive to graph
> >>> structure - eg I think the graph has to be connected for instance,
> >>> otherwise the unconnected parts get thrown to infinity (or 1 million
> >>> if that's larger :) )
> >>>
> >>> Cheers
> >>>
> >>> On Wed, Jul 26, 2006 at 01:58:59PM -0700, Barrett Lyon wrote:
> >>>> Based on my last build of 1.1 I ran into some really odd coords
> >>>> output from lglayout2d causing ImageMaker to crash. I was
> >>>> looking in
> >>>> the lgl.out data and the first line is garbled tabs or something
> >>>> and
> >>>> the coords must be kinda off causing ImageMaker to choke.
> >>>>
> >>>> Any ideas? Has anything major changed from 1.0 to 1.1?
> >>>>
> >>>> -Barrett
> >>>>
> >>>>
> >>>>
> >>>> Barrett Lyon
> >>>> email/sip/iax: bl...@bl...
> >>>> cell: +1.916.387.8649
> >>>>
> >>>
> >>> -- *PS: A number of people ask me about the attachment to my
> >>> email, which
> >>> is of type "application/pgp-signature". Don't worry, it is not a
> >>> virus. It is an electronic signature, that may be used to verify
> >>> this
> >>> email came from me if you have PGP or GPG installed. Otherwise, you
> >>> may safely ignore this attachment.
> >>>
> >>> --------------------------------------------------------------------
> >>> --------
> >>> A/Prof Russell Standish Phone 8308 3119 (mobile)
> >>> Mathematics 0425 253119 (")
> >>> UNSW SYDNEY 2052 R.S...@un...
> >>> Australia http://
> >>> parallel.hpc.unsw.edu.au/rks
> >>> International prefix +612, Interstate prefix 02
> >>> --------------------------------------------------------------------
> >>> --------
> >>
> >
> > -----BEGIN PGP SIGNATURE-----
> > Version: GnuPG v1.4.3 (Darwin)
> >
> > iD8DBQFEyAdcjP38jjmp91IRAkdaAKDMQzcyREUYYy8wpZcNXccoOl3scwCfU+lV
> > cxaAeszzF0rHClY0F6p+iPQ=
> > =lPe5
> > -----END PGP SIGNATURE-----
>
> -----BEGIN PGP SIGNATURE-----
> Version: GnuPG v1.4.3 (Darwin)
>
> iD8DBQFEyAr/jP38jjmp91IRAt5hAKCxyLMK9kn/raV5DqzAsaQqrR+/+wCfXDDl
> vyf/ZeAfao5HMF5h6FkqJZI=
> =w1Ht
> -----END PGP SIGNATURE-----
>
> -------------------------------------------------------------------------
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|
|
From: Russell S. <r.s...@un...> - 2006-07-28 03:14:45
|
It seems that a space is essential between the # and node name, ie
# 1
a
# 2
a
# 3
a
=2E.
seems to produce sane results.
Cheers
On Wed, Jul 26, 2006 at 05:22:52PM -0700, Barrett Lyon wrote:
> -----BEGIN PGP SIGNED MESSAGE-----
> Hash: SHA1
>=20
> Sanity check, did I do the LGL correct? I think that was the right =20
> format?
>=20
>=20
> On Jul 26, 2006, at 5:06 PM, Barrett Lyon wrote:
>=20
> >1.1 seemingly built great but here is the problem I ran into:
> >
> >Here is my test.lgl graph:
> >#1
> >a
> >#2
> >a
> >#3
> >a
> >#4
> >a
> >#5
> >a
> >
> >I run lglayout2d:
> >
> >ramsan1# ./lglayout2D ./test.lgl
> >Reading in Graph from ./test.lgl...
> >Vertex Count: 7
> >Edge Count: 6
> >Outer radius is set to 2.64575
> >Initializing 7 particles...Done.
> >Initializing grid and placing particles...Done.
> >Initializing handlers...Done.
> >Generating Tree and checking for root.
> >Nodes Checked: 8
> >Root Node:
> >There are 1 levels.
> >Initializing 1 thread(s)...Done.
> >Iteration: 151 Dx: 0.835668 Level: 1
> >Final Settle =20
> >Iteration: 203 Dx: 0.832478 Level: 1
> >- Done -
> >
> >
> >The output is resulting as:
> >ramsan1# cat lgl.out
> > =
=20
> > =
=20
> > =
=20
> > 1.94582 1.00213
> >#1 2.57455 0.435078
> >a 1.19351 0.670472
> >#2 2.04038 1.82853
> >#3 2.72835 1.24933
> >#4 1.82669 0.18091
> >#5 1.25832 1.4913
> >
> >
> >Notice the first line, it's full of tabs or something that is high =20
> >ASCII. When I try to run imagemaker on it I get errors and no =20
> >built graph. I tried removing the first line and also ran into the =20
> >same imagemaker error. I attached the full lgl.out so you can see =20
> >what the first line looks like.
> >
> >Any ideas?
> >
> >-Barrett
> >
> ><lgl.out>
> >
> >On Jul 26, 2006, at 5:17 AM, Russell Standish wrote:
> >
> >>I have only used 1.1. Maybe Alex knows.
> >>
> >>However, I have noticed that the algorithm is sensitive to graph
> >>structure - eg I think the graph has to be connected for instance,
> >>otherwise the unconnected parts get thrown to infinity (or 1 million
> >>if that's larger :) )
> >>
> >>Cheers
> >>
> >>On Wed, Jul 26, 2006 at 01:58:59PM -0700, Barrett Lyon wrote:
> >>>Based on my last build of 1.1 I ran into some really odd coords
> >>>output from lglayout2d causing ImageMaker to crash. I was =20
> >>>looking in
> >>>the lgl.out data and the first line is garbled tabs or something and
> >>>the coords must be kinda off causing ImageMaker to choke.
> >>>
> >>>Any ideas? Has anything major changed from 1.0 to 1.1?
> >>>
> >>>-Barrett
> >>>
> >>>
> >>>
> >>>Barrett Lyon
> >>>email/sip/iax: bl...@bl...
> >>>cell: +1.916.387.8649
> >>>
> >>
> >>-- *PS: A number of people ask me about the attachment to my =20
> >>email, which
> >>is of type "application/pgp-signature". Don't worry, it is not a
> >>virus. It is an electronic signature, that may be used to verify this
> >>email came from me if you have PGP or GPG installed. Otherwise, you
> >>may safely ignore this attachment.
> >>
> >>---------------------------------------------------------------------=
=20
> >>-------
> >>A/Prof Russell Standish Phone 8308 3119 (mobile)
> >>Mathematics 0425 253119 (")
> >>UNSW SYDNEY 2052 R.S...@un...
> >>Australia http://=20
> >>parallel.hpc.unsw.edu.au/rks
> >> International prefix +612, Interstate prefix 02
> >>---------------------------------------------------------------------=
=20
> >>-------
> >
>=20
> -----BEGIN PGP SIGNATURE-----
> Version: GnuPG v1.4.3 (Darwin)
>=20
> iD8DBQFEyAdcjP38jjmp91IRAkdaAKDMQzcyREUYYy8wpZcNXccoOl3scwCfU+lV
> cxaAeszzF0rHClY0F6p+iPQ=3D
> =3DlPe5
> -----END PGP SIGNATURE-----
--=20
*PS: A number of people ask me about the attachment to my email, which
is of type "application/pgp-signature". Don't worry, it is not a
virus. It is an electronic signature, that may be used to verify this
email came from me if you have PGP or GPG installed. Otherwise, you
may safely ignore this attachment.
----------------------------------------------------------------------------
A/Prof Russell Standish Phone 8308 3119 (mobile)
Mathematics 0425 253119 (")
UNSW SYDNEY 2052 R.S...@un... =20
Australia http://parallel.hpc.unsw.edu.au/rks
International prefix +612, Interstate prefix 02
----------------------------------------------------------------------------
|
|
From: Russell S. <r.s...@un...> - 2006-07-27 19:56:28
|
Yes, and indeed this is one of the more urgent tasks.
I did start doing a port to Boost 1.33.1, and even got the code to
compile properly, but it didn't run correctly. I don't yet understand
how LGL works well enough to do the debug myself at present. Alex has
the understanding, but not the time... :(
I could upload the version that at least compiles into subversion, though.
Cheers
On Tue, Jul 25, 2006 at 05:59:14PM -0700, Barrett Lyon wrote:
> I'm trying to get LGL 1.1 built on FreeBSD but I am running into a =20
> lot of issues with Boost 1.30.2 not building on the more modern =20
> compilers.
>=20
> Have you guys given any thought to releasing something that can build =20
> on Boost 1.33.1? I have a 4-way amd64 with 64-gigs of ram that I =20
> would like to run some graphs on, but FreeBSD 6.1 refuses to be =20
> friendly with boost 1.30.2.
>=20
> Any ideas?
>=20
>=20
> Barrett Lyon
> email/sip/iax: bl...@bl...
> cell: +1.916.387.8649
>=20
--=20
*PS: A number of people ask me about the attachment to my email, which
is of type "application/pgp-signature". Don't worry, it is not a
virus. It is an electronic signature, that may be used to verify this
email came from me if you have PGP or GPG installed. Otherwise, you
may safely ignore this attachment.
----------------------------------------------------------------------------
A/Prof Russell Standish Phone 8308 3119 (mobile)
Mathematics 0425 253119 (")
UNSW SYDNEY 2052 R.S...@un... =20
Australia http://parallel.hpc.unsw.edu.au/rks
International prefix +612, Interstate prefix 02
----------------------------------------------------------------------------
|
|
From: Barrett L. <bl...@bl...> - 2006-07-27 14:12:40
|
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
Sanity check, did I do the LGL correct? I think that was the right
format?
On Jul 26, 2006, at 5:06 PM, Barrett Lyon wrote:
> 1.1 seemingly built great but here is the problem I ran into:
>
> Here is my test.lgl graph:
> #1
> a
> #2
> a
> #3
> a
> #4
> a
> #5
> a
>
> I run lglayout2d:
>
> ramsan1# ./lglayout2D ./test.lgl
> Reading in Graph from ./test.lgl...
> Vertex Count: 7
> Edge Count: 6
> Outer radius is set to 2.64575
> Initializing 7 particles...Done.
> Initializing grid and placing particles...Done.
> Initializing handlers...Done.
> Generating Tree and checking for root.
> Nodes Checked: 8
> Root Node:
> There are 1 levels.
> Initializing 1 thread(s)...Done.
> Iteration: 151 Dx: 0.835668 Level: 1
> Final Settle
> Iteration: 203 Dx: 0.832478 Level: 1
> - Done -
>
>
> The output is resulting as:
> ramsan1# cat lgl.out
>
>
>
> 1.94582 1.00213
> #1 2.57455 0.435078
> a 1.19351 0.670472
> #2 2.04038 1.82853
> #3 2.72835 1.24933
> #4 1.82669 0.18091
> #5 1.25832 1.4913
>
>
> Notice the first line, it's full of tabs or something that is high
> ASCII. When I try to run imagemaker on it I get errors and no
> built graph. I tried removing the first line and also ran into the
> same imagemaker error. I attached the full lgl.out so you can see
> what the first line looks like.
>
> Any ideas?
>
> -Barrett
>
> <lgl.out>
>
> On Jul 26, 2006, at 5:17 AM, Russell Standish wrote:
>
>> I have only used 1.1. Maybe Alex knows.
>>
>> However, I have noticed that the algorithm is sensitive to graph
>> structure - eg I think the graph has to be connected for instance,
>> otherwise the unconnected parts get thrown to infinity (or 1 million
>> if that's larger :) )
>>
>> Cheers
>>
>> On Wed, Jul 26, 2006 at 01:58:59PM -0700, Barrett Lyon wrote:
>>> Based on my last build of 1.1 I ran into some really odd coords
>>> output from lglayout2d causing ImageMaker to crash. I was
>>> looking in
>>> the lgl.out data and the first line is garbled tabs or something and
>>> the coords must be kinda off causing ImageMaker to choke.
>>>
>>> Any ideas? Has anything major changed from 1.0 to 1.1?
>>>
>>> -Barrett
>>>
>>>
>>>
>>> Barrett Lyon
>>> email/sip/iax: bl...@bl...
>>> cell: +1.916.387.8649
>>>
>>
>> -- *PS: A number of people ask me about the attachment to my
>> email, which
>> is of type "application/pgp-signature". Don't worry, it is not a
>> virus. It is an electronic signature, that may be used to verify this
>> email came from me if you have PGP or GPG installed. Otherwise, you
>> may safely ignore this attachment.
>>
>> ---------------------------------------------------------------------
>> -------
>> A/Prof Russell Standish Phone 8308 3119 (mobile)
>> Mathematics 0425 253119 (")
>> UNSW SYDNEY 2052 R.S...@un...
>> Australia http://
>> parallel.hpc.unsw.edu.au/rks
>> International prefix +612, Interstate prefix 02
>> ---------------------------------------------------------------------
>> -------
>
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=lPe5
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From: Russell S. <r.s...@un...> - 2006-07-27 11:40:11
|
I thought we'd solved this issue - is this an email caught in a time warp? Cheers On Wed, Jul 26, 2006 at 01:58:59PM -0700, Barrett Lyon wrote: > Based on my last build of 1.1 I ran into some really odd coords =20 > output from lglayout2d causing ImageMaker to crash. I was looking in =20 > the lgl.out data and the first line is garbled tabs or something and =20 > the coords must be kinda off causing ImageMaker to choke. >=20 > Any ideas? Has anything major changed from 1.0 to 1.1? >=20 > -Barrett >=20 >=20 >=20 > Barrett Lyon > email/sip/iax: bl...@bl... > cell: +1.916.387.8649 >=20 >=20 >=20 > ------------------------------------------------------------------------- > Take Surveys. Earn Cash. Influence the Future of IT > Join SourceForge.net's Techsay panel and you'll get the chance to share y= our > opinions on IT & business topics through brief surveys -- and earn cash > http://www.techsay.com/default.php?page=3Djoin.php&p=3Dsourceforge&CID=3D= DEVDEV > _______________________________________________ > Lgl-developer mailing list > Lgl...@li... > https://lists.sourceforge.net/lists/listinfo/lgl-developer --=20 *PS: A number of people ask me about the attachment to my email, which is of type "application/pgp-signature". Don't worry, it is not a virus. It is an electronic signature, that may be used to verify this email came from me if you have PGP or GPG installed. Otherwise, you may safely ignore this attachment. ---------------------------------------------------------------------------- A/Prof Russell Standish Phone 8308 3119 (mobile) Mathematics 0425 253119 (") UNSW SYDNEY 2052 R.S...@un... =20 Australia http://parallel.hpc.unsw.edu.au/rks International prefix +612, Interstate prefix 02 ---------------------------------------------------------------------------- |
|
From: Barrett L. <bl...@bl...> - 2006-07-27 06:28:10
|
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
I think I should have RTFM a little better, my example did not have a
space between the # and the edge. I think it's working now.
- -B
On Jul 26, 2006, at 5:22 PM, Barrett Lyon wrote:
> -----BEGIN PGP SIGNED MESSAGE-----
> Hash: SHA1
>
> Sanity check, did I do the LGL correct? I think that was the right
> format?
>
>
> On Jul 26, 2006, at 5:06 PM, Barrett Lyon wrote:
>
>> 1.1 seemingly built great but here is the problem I ran into:
>>
>> Here is my test.lgl graph:
>> #1
>> a
>> #2
>> a
>> #3
>> a
>> #4
>> a
>> #5
>> a
>>
>> I run lglayout2d:
>>
>> ramsan1# ./lglayout2D ./test.lgl
>> Reading in Graph from ./test.lgl...
>> Vertex Count: 7
>> Edge Count: 6
>> Outer radius is set to 2.64575
>> Initializing 7 particles...Done.
>> Initializing grid and placing particles...Done.
>> Initializing handlers...Done.
>> Generating Tree and checking for root.
>> Nodes Checked: 8
>> Root Node:
>> There are 1 levels.
>> Initializing 1 thread(s)...Done.
>> Iteration: 151 Dx: 0.835668 Level: 1
>> Final Settle
>> Iteration: 203 Dx: 0.832478 Level: 1
>> - Done -
>>
>>
>> The output is resulting as:
>> ramsan1# cat lgl.out
>>
>>
>>
>> 1.94582 1.00213
>> #1 2.57455 0.435078
>> a 1.19351 0.670472
>> #2 2.04038 1.82853
>> #3 2.72835 1.24933
>> #4 1.82669 0.18091
>> #5 1.25832 1.4913
>>
>>
>> Notice the first line, it's full of tabs or something that is high
>> ASCII. When I try to run imagemaker on it I get errors and no
>> built graph. I tried removing the first line and also ran into
>> the same imagemaker error. I attached the full lgl.out so you can
>> see what the first line looks like.
>>
>> Any ideas?
>>
>> -Barrett
>>
>> <lgl.out>
>>
>> On Jul 26, 2006, at 5:17 AM, Russell Standish wrote:
>>
>>> I have only used 1.1. Maybe Alex knows.
>>>
>>> However, I have noticed that the algorithm is sensitive to graph
>>> structure - eg I think the graph has to be connected for instance,
>>> otherwise the unconnected parts get thrown to infinity (or 1 million
>>> if that's larger :) )
>>>
>>> Cheers
>>>
>>> On Wed, Jul 26, 2006 at 01:58:59PM -0700, Barrett Lyon wrote:
>>>> Based on my last build of 1.1 I ran into some really odd coords
>>>> output from lglayout2d causing ImageMaker to crash. I was
>>>> looking in
>>>> the lgl.out data and the first line is garbled tabs or something
>>>> and
>>>> the coords must be kinda off causing ImageMaker to choke.
>>>>
>>>> Any ideas? Has anything major changed from 1.0 to 1.1?
>>>>
>>>> -Barrett
>>>>
>>>>
>>>>
>>>> Barrett Lyon
>>>> email/sip/iax: bl...@bl...
>>>> cell: +1.916.387.8649
>>>>
>>>
>>> -- *PS: A number of people ask me about the attachment to my
>>> email, which
>>> is of type "application/pgp-signature". Don't worry, it is not a
>>> virus. It is an electronic signature, that may be used to verify
>>> this
>>> email came from me if you have PGP or GPG installed. Otherwise, you
>>> may safely ignore this attachment.
>>>
>>> --------------------------------------------------------------------
>>> --------
>>> A/Prof Russell Standish Phone 8308 3119 (mobile)
>>> Mathematics 0425 253119 (")
>>> UNSW SYDNEY 2052 R.S...@un...
>>> Australia http://
>>> parallel.hpc.unsw.edu.au/rks
>>> International prefix +612, Interstate prefix 02
>>> --------------------------------------------------------------------
>>> --------
>>
>
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>
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> cxaAeszzF0rHClY0F6p+iPQ=
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|
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From: Russell S. <r.s...@un...> - 2006-07-27 03:02:50
|
I have only used 1.1. Maybe Alex knows.
However, I have noticed that the algorithm is sensitive to graph
structure - eg I think the graph has to be connected for instance,
otherwise the unconnected parts get thrown to infinity (or 1 million
if that's larger :) )
Cheers
On Wed, Jul 26, 2006 at 01:58:59PM -0700, Barrett Lyon wrote:
> Based on my last build of 1.1 I ran into some really odd coords =20
> output from lglayout2d causing ImageMaker to crash. I was looking in =20
> the lgl.out data and the first line is garbled tabs or something and =20
> the coords must be kinda off causing ImageMaker to choke.
>=20
> Any ideas? Has anything major changed from 1.0 to 1.1?
>=20
> -Barrett
>=20
>=20
>=20
> Barrett Lyon
> email/sip/iax: bl...@bl...
> cell: +1.916.387.8649
>=20
--=20
*PS: A number of people ask me about the attachment to my email, which
is of type "application/pgp-signature". Don't worry, it is not a
virus. It is an electronic signature, that may be used to verify this
email came from me if you have PGP or GPG installed. Otherwise, you
may safely ignore this attachment.
----------------------------------------------------------------------------
A/Prof Russell Standish Phone 8308 3119 (mobile)
Mathematics 0425 253119 (")
UNSW SYDNEY 2052 R.S...@un... =20
Australia http://parallel.hpc.unsw.edu.au/rks
International prefix +612, Interstate prefix 02
----------------------------------------------------------------------------
|
|
From: Barrett L. <bl...@bl...> - 2006-07-27 00:14:27
|
Based on my last build of 1.1 I ran into some really odd coords output from lglayout2d causing ImageMaker to crash. I was looking in the lgl.out data and the first line is garbled tabs or something and the coords must be kinda off causing ImageMaker to choke. Any ideas? Has anything major changed from 1.0 to 1.1? -Barrett Barrett Lyon email/sip/iax: bl...@bl... cell: +1.916.387.8649 |
|
From: Barrett L. <bl...@bi...> - 2006-07-26 03:57:46
|
Hi Russell,
I hacked it together to get it building on DragonFly BSD and FreeBSD
6.x:
In the src/Makefile I added "-DWCHAR_MIN=0 -DWCHAR_MAX=65535" to the
CPP_FLAGS
I also changed -lpthreads to -pthreads (no longer referenced by -l)
To fix things at compile time:
On line 127 of include/sphere.hpp:
I changed:
typedef typename boost::hellekalek1995 precision;
To:
typedef boost::hellekalek1995 precision;
Then I was set! My next tax is to build the Java stuff, do you have
anything pre-built that you can list on the web site?
Oh, and THANK YOU for taking up the maintenance of the project!
-Barrett
On Jul 24, 2006, at 6:18 PM, Russell Standish wrote:
> Yes, and indeed this is one of the more urgent tasks.
>
> I did start doing a port to Boost 1.33.1, and even got the code to
> compile properly, but it didn't run correctly. I don't yet understand
> how LGL works well enough to do the debug myself at present. Alex has
> the understanding, but not the time... :(
>
> I could upload the version that at least compiles into subversion,
> though.
>
> Cheers
>
>
> On Tue, Jul 25, 2006 at 05:59:14PM -0700, Barrett Lyon wrote:
>> I'm trying to get LGL 1.1 built on FreeBSD but I am running into a
>> lot of issues with Boost 1.30.2 not building on the more modern
>> compilers.
>>
>> Have you guys given any thought to releasing something that can build
>> on Boost 1.33.1? I have a 4-way amd64 with 64-gigs of ram that I
>> would like to run some graphs on, but FreeBSD 6.1 refuses to be
>> friendly with boost 1.30.2.
>>
>> Any ideas?
>>
>>
>> Barrett Lyon
>> email/sip/iax: bl...@bl...
>> cell: +1.916.387.8649
>>
>
> --
> *PS: A number of people ask me about the attachment to my email, which
> is of type "application/pgp-signature". Don't worry, it is not a
> virus. It is an electronic signature, that may be used to verify this
> email came from me if you have PGP or GPG installed. Otherwise, you
> may safely ignore this attachment.
>
> ----------------------------------------------------------------------
> ------
> A/Prof Russell Standish Phone 8308 3119 (mobile)
> Mathematics 0425 253119 (")
> UNSW SYDNEY 2052 R.S...@un...
> Australia http://
> parallel.hpc.unsw.edu.au/rks
> International prefix +612, Interstate prefix 02
> ----------------------------------------------------------------------
> ------
|
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