LDx Wiki
LDx uses approximate ML to estimate linkage from pooled NGS data
Brought to you by:
affeder
LDx can be downloaded here
A user manual is available for syntax, output, etc.
A sample dataset with a description is also available.
For more details about the algorithms used in LDx, and its performance, please see our paper.
Please address any questions to Alison Feder afeder@stanford.edu and we hope you find LDx useful in your analysis of pooled data.