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<rss version="2.0" xmlns:atom="http://www.w3.org/2005/Atom"><channel><title>Recent changes to lu_dump_pc_cell</title><link>https://sourceforge.net/p/laueutil/wiki/lu_dump_pc_cell/</link><description>Recent changes to lu_dump_pc_cell</description><atom:link href="https://sourceforge.net/p/laueutil/wiki/lu_dump_pc_cell/feed" rel="self"/><language>en</language><lastBuildDate>Wed, 12 Jun 2013 18:57:15 -0000</lastBuildDate><atom:link href="https://sourceforge.net/p/laueutil/wiki/lu_dump_pc_cell/feed" rel="self" type="application/rss+xml"/><item><title>lu_dump_pc_cell modified by Anna Makal</title><link>https://sourceforge.net/p/laueutil/wiki/lu_dump_pc_cell/</link><description>&lt;div class="markdown_content"&gt;&lt;h1 id="lu_dump_pc_cell"&gt;lu_dump_pc_cell&lt;/h1&gt;
&lt;div class="codehilite"&gt;&lt;pre&gt;    &lt;span class="nl"&gt;Usage:&lt;/span&gt; &lt;span class="p"&gt;[&lt;/span&gt;&lt;span class="n"&gt;python&lt;/span&gt;&lt;span class="p"&gt;]&lt;/span&gt; &lt;span class="n"&gt;lu_dump_pc_cell&lt;/span&gt;&lt;span class="p"&gt;.&lt;/span&gt;&lt;span class="n"&gt;py&lt;/span&gt; &lt;span class="p"&gt;[&lt;/span&gt;&lt;span class="n"&gt;options&lt;/span&gt;&lt;span class="p"&gt;]&lt;/span&gt; &lt;span class="n"&gt;LaueCollect1&lt;/span&gt;&lt;span class="p"&gt;.&lt;/span&gt;&lt;span class="n"&gt;log&lt;/span&gt; &lt;span class="p"&gt;[&lt;/span&gt;&lt;span class="n"&gt;LaueCollect2&lt;/span&gt;&lt;span class="p"&gt;.&lt;/span&gt;&lt;span class="n"&gt;log&lt;/span&gt; &lt;span class="p"&gt;...]&lt;/span&gt; &lt;span class="p"&gt;[&lt;/span&gt;&lt;span class="o"&gt;&amp;gt;&lt;/span&gt; &lt;span class="n"&gt;file_dump_cell&lt;/span&gt;&lt;span class="p"&gt;.&lt;/span&gt;&lt;span class="n"&gt;dat&lt;/span&gt;&lt;span class="p"&gt;]&lt;/span&gt;

    &lt;span class="nl"&gt;Options:&lt;/span&gt;
      &lt;span class="o"&gt;-&lt;/span&gt;&lt;span class="n"&gt;h&lt;/span&gt;&lt;span class="p"&gt;,&lt;/span&gt; &lt;span class="o"&gt;--&lt;/span&gt;&lt;span class="n"&gt;help&lt;/span&gt;            &lt;span class="n"&gt;show&lt;/span&gt; &lt;span class="n"&gt;this&lt;/span&gt; &lt;span class="n"&gt;help&lt;/span&gt; &lt;span class="n"&gt;message&lt;/span&gt; &lt;span class="n"&gt;and&lt;/span&gt; &lt;span class="n"&gt;exit&lt;/span&gt;
      &lt;span class="o"&gt;-&lt;/span&gt;&lt;span class="n"&gt;p&lt;/span&gt; &lt;span class="n"&gt;PC_PATH&lt;/span&gt;&lt;span class="p"&gt;,&lt;/span&gt; &lt;span class="o"&gt;--&lt;/span&gt;&lt;span class="n"&gt;pc_path&lt;/span&gt;&lt;span class="o"&gt;=&lt;/span&gt;&lt;span class="n"&gt;PC_PATH&lt;/span&gt;
                            &lt;span class="n"&gt;path&lt;/span&gt; &lt;span class="n"&gt;to&lt;/span&gt; &lt;span class="n"&gt;Precognition&lt;/span&gt; &lt;span class="p"&gt;.&lt;/span&gt;&lt;span class="n"&gt;inp&lt;/span&gt; &lt;span class="n"&gt;files&lt;/span&gt; &lt;span class="p"&gt;[&lt;/span&gt;&lt;span class="k"&gt;default&lt;/span&gt;&lt;span class="o"&gt;:&lt;/span&gt; &lt;span class="n"&gt;indexing&lt;/span&gt;&lt;span class="p"&gt;]&lt;/span&gt;
      &lt;span class="o"&gt;-&lt;/span&gt;&lt;span class="n"&gt;m&lt;/span&gt; &lt;span class="n"&gt;MATRIX&lt;/span&gt;&lt;span class="p"&gt;,&lt;/span&gt; &lt;span class="o"&gt;--&lt;/span&gt;&lt;span class="n"&gt;matrix&lt;/span&gt;&lt;span class="o"&gt;=&lt;/span&gt;&lt;span class="n"&gt;MATRIX&lt;/span&gt;
                            &lt;span class="n"&gt;reference&lt;/span&gt; &lt;span class="n"&gt;rotation&lt;/span&gt; &lt;span class="n"&gt;matrix&lt;/span&gt; &lt;span class="p"&gt;[&lt;/span&gt;&lt;span class="k"&gt;default&lt;/span&gt;&lt;span class="o"&gt;:&lt;/span&gt; &lt;span class="p"&gt;]&lt;/span&gt;
&lt;/pre&gt;&lt;/div&gt;
&lt;p&gt;&lt;em&gt;Input&lt;/em&gt; - a series of &lt;em&gt;.mccd.inp&lt;/em&gt; files produced by Precognition-Refine procedure for each experimental MCCD frame and &lt;code&gt;LaueCollect.log&lt;/code&gt; file associated with&lt;br /&gt;
their acquisition.&lt;/p&gt;
&lt;p&gt;&lt;em&gt;Output&lt;/em&gt; - a listing of refined parameters from the Precognition-Refine procedure in text format, optionally appended by Euler angles discrepancies. Number of&lt;br /&gt;
 OFF frame, ON frame, a, b, c, alpha, beta, gamma, Volume, crystal to detector distance, X and Y beam center position, 3 Euler angles discrepancies and amximu&lt;br /&gt;
m of those three values are reported in according order:&lt;/p&gt;
&lt;div class="codehilite"&gt;&lt;pre&gt;    &lt;span class="mi"&gt;1&lt;/span&gt;    &lt;span class="mi"&gt;0&lt;/span&gt;     &lt;span class="mf"&gt;12.071&lt;/span&gt;   &lt;span class="mf"&gt;21.192&lt;/span&gt;   &lt;span class="mf"&gt;17.246&lt;/span&gt;     &lt;span class="mf"&gt;90.000&lt;/span&gt;   &lt;span class="mf"&gt;94.009&lt;/span&gt;   &lt;span class="mf"&gt;90.000&lt;/span&gt;       &lt;span class="mf"&gt;4400.881&lt;/span&gt;     &lt;span class="mf"&gt;65.400&lt;/span&gt;   &lt;span class="mf"&gt;1002.270&lt;/span&gt; &lt;span class="mf"&gt;1025.280&lt;/span&gt;   &lt;span class="o"&gt;-&lt;/span&gt;&lt;span class="mf"&gt;1.742&lt;/span&gt;  &lt;span class="mf"&gt;9.981&lt;/span&gt; &lt;span class="o"&gt;-&lt;/span&gt;&lt;span class="mf"&gt;0.719&lt;/span&gt;  &lt;span class="mf"&gt;9.981&lt;/span&gt;
&lt;/pre&gt;&lt;/div&gt;
&lt;p&gt;The program combines information on refinable parameters from Precognition outputs into a single text file suitable for statistical analysis. The listed param&lt;br /&gt;
eters are: unit cell parameters, cell volume, crystal to detector distance, XY positions of the beam center. Option -m, when used, allows to perform additiona&lt;br /&gt;
l comparison of the Precognition orientation matrix parameters with a reference orientation matrix. The reference orientation matrix must be supplied as a str&lt;br /&gt;
ing of 9 values separated by spaces, e.g.:&lt;/p&gt;
&lt;div class="codehilite"&gt;&lt;pre&gt;    &lt;span class="err"&gt;'&lt;/span&gt;&lt;span class="mf"&gt;0.262333&lt;/span&gt; &lt;span class="o"&gt;-&lt;/span&gt;&lt;span class="mf"&gt;0.589349&lt;/span&gt; &lt;span class="mf"&gt;0.764100&lt;/span&gt;   &lt;span class="o"&gt;-&lt;/span&gt;&lt;span class="mf"&gt;0.163929&lt;/span&gt; &lt;span class="o"&gt;-&lt;/span&gt;&lt;span class="mf"&gt;0.807541&lt;/span&gt; &lt;span class="o"&gt;-&lt;/span&gt;&lt;span class="mf"&gt;0.566573&lt;/span&gt;  &lt;span class="mf"&gt;0.950951&lt;/span&gt; &lt;span class="mf"&gt;0.023373&lt;/span&gt; &lt;span class="o"&gt;-&lt;/span&gt;&lt;span class="mf"&gt;0.308456&lt;/span&gt;&lt;span class="err"&gt;'&lt;/span&gt;
&lt;/pre&gt;&lt;/div&gt;
&lt;/div&gt;</description><dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/">Anna Makal</dc:creator><pubDate>Wed, 12 Jun 2013 18:57:15 -0000</pubDate><guid>https://sourceforge.net5c94abce936dabf6d9d0c24b2b05f4d9068cdb2f</guid></item></channel></rss>