Error when Placing SNPs on nodes SNPs_all tree

[Eric Fournier]

Hi,
I am running kSNP4.1 on a CentOS Linux release 7.9.2009 and I get the following error at the final step of Placing SNPs on nodes SNPs_all tree;
[36019] Error loading Python lib '/archives/tmp_eric2/_MEIvd5yJI/libpython3.10.so.1.0': dlopen: /lib64/libm.so.6: version `GLIBC_2.35' not found (required by /archives/tmp_eric2/_MEIvd5yJI/libpython3.10.so.1.0)

As result, all tip SNPs count in tree_tipAlleleCounts.parsimony.tre are 0.

Currently ldd (GNU libc) 2.17 is installed on our server.

I think the best way to fix it is to recompile from source. Is it possible to provide a README which explain how to compile the program?

Thanks
Eric

[Kenny OBERLE]

Hi,
I am also running kSNP4.1 and I got the same issue for the SNPs count (0 is indicated in tree) but also to use the parseNCBIcsv command.
The message was as follow:
"Error loading Python lib '/tmp/_MEIoPrYG7/libpython3.10.so.1.0': dlopen: /lib64/libm.so.6: version `GLIBC_2.35' not found (required by /tmp/_MEIoPrYG7/libpython3.10.so.1.0)"

Currently, ldd (GNU libdc) 2.28 is intalled on our server.**

It seems that there is no source to compile in the repertoire /usr/local/src/kSNP4/kSNP4.1_source/

Please could your provide us a readme file but also sources to compile?

Thanks a lot.

BR

Kenny