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#20 ATAC_makeplot reflength total error

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nobody
ATAC (6)
5
2015-03-04
2010-11-10
JordyBurton
No

K-mer Tools,
I believe there could be a bug in the code for ATAC makeplot.pl script.
First, reflength totals all bp in assembly. The script is written to include fasta headers beginning with “>”. A regular expression was added to remove headers from reflength total.

Attached is screen print to support the edit.

Discussion

  • JordyBurton

    JordyBurton - 2010-11-10

    Makeplot and output showing error

     
  • Dan Bolser

    Dan Bolser - 2015-03-04

    Can you submit a patch to fix this?

     

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