[Jtreeview-users] RE: No trees

[Holweg, C. <ch...@cv...>]

Hello again,
I just e-mailed about not getting trees when using java treeview. 
I solved the problem by changing the name of the file. Remembered that I had
it before and also asked the question back then.
I recalled that it had something to do with the name and it seemed to be the
problem again.
Sorry for taking your time,
Cecile

> _____________________________________________ 
> From: 	Holweg, Cecile  
> Sent:	Friday, March 17, 2006 4:31 PM
> To:	'jtr...@li...'
> Subject:	No trees
> 
> Hello,
> I try to use Java treeview and do not get any trees and get an error
> message when loading the file. See the error message below. I do get a
> heatmap, just not the dendrograms.
> I tried to find the problem in the manual, but could not solve it. 
> I used the program before with other files and it was fine. 
> Can you tell me what I do wrong? 
> Thanks,
> Cecile
> 
> Error message:
> 
> parsing kag
> error parsing KAG: LoadException 1: Url
> H:\Data\Stanford\microarray\analysis files\analysis 150306\1B-3A_B\cluster
> 1B_AR2.kag could not be opened: unknown protocol: h
> ignoring array k-means clusters.
> loading H:\Data\Stanford\microarray\analysis files\analysis
> 150306\1B-3A_B\cluster 1B_AR2.cdt ... 
> Finding Cdt Dimensions
> Loading Array Annotations...
> Loading Gene Annotations...
> Parsing strings into doubles...
> parsing jtv config file
> 
> 
> Cecile Holweg, PhD
> Falk CVRC
> Stanford University Medical Center
> 300 Pasteur Drive
> Stanford CA 94305-5406
> USA
> Tel: 650 725 3775
> Fax: 650 725 1599
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>